Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 SNRPCP11-201ENST00000492453 205 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 snoU109.5-201ENST00000516231 132 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 HMGN2P47-201ENST00000559378 272 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC007346.2-201ENST00000564816 892 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC006363.1-201ENST00000603806 463 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC096861.1-201ENST00000616652 240 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 AC002525.1-201ENST00000624392 1622 ntBASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CCDC50Q8IVM0 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 SNORA21-201ENST00000362423 132 ntBASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 RNU1-134P-201ENST00000362935 165 ntBASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 U3.10-201ENST00000364459 214 ntBASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 RPL7AP51-201ENST00000422016 760 ntBASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 AL136231.1-201ENST00000429407 730 ntBASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 AC099670.2-201ENST00000435130 321 ntBASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 CYCSP51-201ENST00000443545 318 ntBASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 RPL12P24-201ENST00000474907 486 ntBASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 CR383658.1-201ENST00000514609 734 ntBASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 LDHBP3-201ENST00000514909 822 ntBASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 RPL12P48-201ENST00000605620 304 ntBASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 MTCO1P28-201ENST00000574177 1528 ntBASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC50Q8IVM0 RPS2P45-201ENST00000469997 2057 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AC139426.3-201ENST00000605648 2059 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AL034546.1-201ENST00000623740 3693 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AC130304.1-201ENST00000622942 2385 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 RN7SKP128-201ENST00000364270 303 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AC245096.1-201ENST00000413104 546 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AL121878.1-201ENST00000418638 859 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AC130360.1-201ENST00000425489 1117 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 RPSAP32-201ENST00000432681 526 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AC064862.5-201ENST00000440618 334 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 FTLP8-201ENST00000446770 267 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AL603882.1-201ENST00000463059 681 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 PFN1P6-201ENST00000476786 399 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 OR7E22P-201ENST00000478335 1035 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 RPS27P20-201ENST00000492051 246 ntBASIC6.22□□□□□ -1.41
CCDC50Q8IVM0 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms