Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC019080.5-201ENST00000624891 757 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 AC005702.3-201ENST00000585345 1447 ntBASIC6.47□□□□□ -1.37
CCDC38Q502W7 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC38Q502W7 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC38Q502W7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.46□□□□□ -1.37
CCDC38Q502W7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.46□□□□□ -1.37
CCDC38Q502W7 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CCDC38Q502W7 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCDC38Q502W7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC38Q502W7 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC38Q502W7 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC38Q502W7 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC38Q502W7 RNU1-84P-201ENST00000365447 164 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC38Q502W7 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 RNU6-40P-201ENST00000384254 107 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 ARSFP1-201ENST00000398758 477 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC38Q502W7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC083862.1-201ENST00000427378 1242 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 PPIAP32-201ENST00000449940 472 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 NPM1P9-201ENST00000453156 844 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 RPS27AP3-201ENST00000453803 454 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC019084.1-201ENST00000457337 432 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 RN7SL83P-201ENST00000468131 297 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC098583.1-201ENST00000480875 255 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC015864.1-201ENST00000496512 544 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC008628.1-201ENST00000508663 265 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 MRPS5P3-201ENST00000515577 166 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC016550.3-201ENST00000515706 767 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 RN7SKP34-201ENST00000516142 244 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC134349.2-201ENST00000535136 910 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC090651.1-201ENST00000567865 634 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 TMF1P1-201ENST00000576058 373 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 MIR3189-201ENST00000578735 73 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC024267.2-201ENST00000582737 417 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 RPL7AP69-201ENST00000595306 806 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC002069.2-201ENST00000603580 883 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 AL133445.2-201ENST00000611191 527 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC244100.4-201ENST00000617747 388 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC38Q502W7 LINC02495-203ENST00000636704 242 ntBASIC6.46□□□□□ -1.38
CCDC38Q502W7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC38Q502W7 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC38Q502W7 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCDC38Q502W7 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
CCDC38Q502W7 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC38Q502W7 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC38Q502W7 SNORD51.1-201ENST00000365405 77 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC38Q502W7 AL033519.1-201ENST00000407266 307 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 RN7SKP221-201ENST00000410420 301 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 EIF2S2P3-201ENST00000428356 999 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCDC38Q502W7 MED28P4-201ENST00000433137 572 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 PSMD8P1-201ENST00000436275 769 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 CYCSP53-201ENST00000455540 265 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 AL355032.1-201ENST00000472981 438 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 AC022730.1-201ENST00000473114 568 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.45□□□□□ -1.38
CCDC38Q502W7 MIR4433B-201ENST00000581329 102 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 RN7SL475P-201ENST00000583379 298 ntBASIC6.45□□□□□ -1.38
CCDC38Q502W7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 183.6 ms