Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 AC011815.2-201ENST00000618230 2021 ntBASIC5.04□□□□□ -1.6
CX3CL1P78423 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.04□□□□□ -1.6
CX3CL1P78423 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
CX3CL1P78423 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CX3CL1P78423 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.03□□□□□ -1.6
CX3CL1P78423 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CX3CL1P78423 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 AL592429.1-201ENST00000403909 1473 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AC010132.2-201ENST00000295493 1043 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 SNORD115-48-201ENST00000364764 76 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 SNORD65-201ENST00000391079 73 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CX3CL1P78423 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 PRELID1P1-201ENST00000403549 660 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.03□□□□□ -1.6
CX3CL1P78423 CYP4F30P-202ENST00000420048 405 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 Z82198.3-201ENST00000421145 199 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC5.03□□□□□ -1.6
CX3CL1P78423 EMC3-AS1-205ENST00000438698 534 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 GTF2IP14-201ENST00000441415 586 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.03□□□□□ -1.6
CX3CL1P78423 OR2L9P-201ENST00000444456 913 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.03□□□□□ -1.6
CX3CL1P78423 REG1CP-206ENST00000447469 496 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 AC092967.1-201ENST00000449016 481 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 VPS25P1-201ENST00000455691 508 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 RPS7P10-201ENST00000464254 603 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 GM2AP2-201ENST00000491764 562 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 AC090058.1-201ENST00000498788 435 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AC093816.1-201ENST00000515076 913 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 AC016550.3-201ENST00000515706 767 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.03□□□□□ -1.6
CX3CL1P78423 IGHV4-55-201ENST00000520889 368 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.03□□□□□ -1.6
CX3CL1P78423 CYCSP25-201ENST00000525280 316 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.03□□□□□ -1.6
CX3CL1P78423 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.03□□□□□ -1.6
CX3CL1P78423 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AC063977.7-201ENST00000594454 337 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 AL589863.1-201ENST00000595383 631 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.03□□□□□ -1.6
CX3CL1P78423 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 AC012368.3-201ENST00000604190 219 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 SNORA74.4-201ENST00000607595 199 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.03□□□□□ -1.6
CX3CL1P78423 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.03□□□□□ -1.6
CX3CL1P78423 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 AP006248.3-201ENST00000623580 594 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC5.03□□□□□ -1.6
CX3CL1P78423 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CX3CL1P78423 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.03□□□□□ -1.6
CX3CL1P78423 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.03□□□□□ -1.6
CX3CL1P78423 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 AC009501.3-201ENST00000605001 1352 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CX3CL1P78423 AL136984.1-201ENST00000607611 1893 ntBASIC5.03□□□□□ -1.6
CX3CL1P78423 BIN2P1-201ENST00000504996 1530 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC245100.2-201ENST00000454544 1679 ntBASIC5.02□□□□□ -1.61
CX3CL1P78423 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.02□□□□□ -1.61
CX3CL1P78423 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CX3CL1P78423 AC015799.1-201ENST00000622996 3122 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms