Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.39□□□□□ -1.39
HDAC4P56524 AC087272.1-201ENST00000523624 533 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.39□□□□□ -1.39
HDAC4P56524 AC021269.1-201ENST00000526860 705 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.39□□□□□ -1.39
HDAC4P56524 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.39□□□□□ -1.39
HDAC4P56524 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.39□□□□□ -1.39
HDAC4P56524 RN7SL261P-201ENST00000613441 282 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 MIR6721-201ENST00000617181 87 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 MIR6861-201ENST00000618657 64 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.39□□□□□ -1.39
HDAC4P56524 AC073488.6-201ENST00000632293 754 ntBASIC6.39□□□□□ -1.39
HDAC4P56524 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC4P56524 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC4P56524 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
HDAC4P56524 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC4P56524 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC4P56524 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC4P56524 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HDAC4P56524 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.39□□□□□ -1.39
HDAC4P56524 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
HDAC4P56524 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HDAC4P56524 AC010266.2-201ENST00000564741 3255 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC4P56524 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC4P56524 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC4P56524 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
HDAC4P56524 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC4P56524 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
HDAC4P56524 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC4P56524 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
HDAC4P56524 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC4P56524 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC4P56524 MTND3P20-201ENST00000407663 186 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC4P56524 IGLV3-4-201ENST00000432300 244 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.38□□□□□ -1.39
HDAC4P56524 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.38□□□□□ -1.39
HDAC4P56524 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.38□□□□□ -1.39
HDAC4P56524 AC010240.2-201ENST00000445363 1205 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.38□□□□□ -1.39
HDAC4P56524 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.38□□□□□ -1.39
HDAC4P56524 AL035690.1-201ENST00000490892 383 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 RPS26P24-201ENST00000497656 331 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 OR7E99P-201ENST00000505750 922 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.38□□□□□ -1.39
HDAC4P56524 SETP21-201ENST00000514799 892 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.38□□□□□ -1.39
HDAC4P56524 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC4P56524 MRPS21P8-201ENST00000569196 235 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 AC009303.3-201ENST00000591103 736 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 AL021368.1-201ENST00000607490 540 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 AC239803.2-201ENST00000610161 430 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 AL353684.1-201ENST00000622677 1120 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC4P56524 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC4P56524 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC4P56524 AL357140.4-201ENST00000636827 412 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC6.38□□□□□ -1.39
HDAC4P56524 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC6.38□□□□□ -1.39
HDAC4P56524 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC4P56524 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC4P56524 PPBPP2-201ENST00000513150 1362 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC4P56524 RNF19BPY-201ENST00000458209 1550 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 AL513548.1-201ENST00000562904 1724 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC4P56524 ICE2P1-201ENST00000512800 1849 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.38□□□□□ -1.39
HDAC4P56524 AC119674.1-202ENST00000641333 1860 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HDAC4P56524 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC4P56524 AC020633.1-201ENST00000468439 2247 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.38□□□□□ -1.39
HDAC4P56524 AC068870.3-201ENST00000625077 2536 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
HDAC4P56524 AC015799.1-201ENST00000622996 3122 ntBASIC6.38□□□□□ -1.39
HDAC4P56524 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HDAC4P56524 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC4P56524 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.37□□□□□ -1.39
HDAC4P56524 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HDAC4P56524 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC4P56524 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HDAC4P56524 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HDAC4P56524 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.37□□□□□ -1.39
HDAC4P56524 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.37□□□□□ -1.39
HDAC4P56524 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.37□□□□□ -1.39
HDAC4P56524 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC4P56524 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.37□□□□□ -1.39
HDAC4P56524 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.37□□□□□ -1.39
HDAC4P56524 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HDAC4P56524 SNORA21-201ENST00000362423 132 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 RNU4-23P-201ENST00000362839 140 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 RNA5SP375-201ENST00000362975 119 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC4P56524 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HDAC4P56524 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 AC079807.1-201ENST00000429993 481 ntBASIC6.37□□□□□ -1.39
HDAC4P56524 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms