Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC10.17□□□□□ -0.78
SMARCA2P51531 AC092106.1-201ENST00000444291 373 ntBASIC10.17□□□□□ -0.78
SMARCA2P51531 RN7SL352P-201ENST00000466002 277 ntBASIC10.17□□□□□ -0.78
SMARCA2P51531 AC105384.2-201ENST00000508433 640 ntBASIC10.17□□□□□ -0.78
SMARCA2P51531 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC10.17□□□□□ -0.78
SMARCA2P51531 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC10.17□□□□□ -0.78
SMARCA2P51531 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
SMARCA2P51531 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC10.17□□□□□ -0.78
SMARCA2P51531 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC10.17□□□□□ -0.78
SMARCA2P51531 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC10.17□□□□□ -0.78
SMARCA2P51531 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC10.17□□□□□ -0.78
SMARCA2P51531 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SMARCA2P51531 AC130304.1-201ENST00000622942 2385 ntBASIC10.17□□□□□ -0.78
SMARCA2P51531 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC10.16□□□□□ -0.78
SMARCA2P51531 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SMARCA2P51531 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
SMARCA2P51531 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC10.16□□□□□ -0.78
SMARCA2P51531 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC10.16□□□□□ -0.78
SMARCA2P51531 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SMARCA2P51531 RN7SKP104-201ENST00000362605 328 ntBASIC10.16□□□□□ -0.78
SMARCA2P51531 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SMARCA2P51531 RPS6P23-201ENST00000413224 722 ntBASIC10.16□□□□□ -0.78
SMARCA2P51531 AL035690.1-201ENST00000490892 383 ntBASIC10.16□□□□□ -0.78
SMARCA2P51531 SNRPCP2-201ENST00000504370 475 ntBASIC10.16□□□□□ -0.78
SMARCA2P51531 CYP4F27P-201ENST00000514557 494 ntBASIC10.16□□□□□ -0.78
SMARCA2P51531 AC013701.1-201ENST00000522657 465 ntBASIC10.16□□□□□ -0.78
SMARCA2P51531 RBM22P1-201ENST00000578589 1214 ntBASIC10.16□□□□□ -0.78
SMARCA2P51531 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMARCA2P51531 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SMARCA2P51531 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC10.16□□□□□ -0.78
SMARCA2P51531 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SMARCA2P51531 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
SMARCA2P51531 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
SMARCA2P51531 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SMARCA2P51531 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC10.15□□□□□ -0.78
SMARCA2P51531 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SMARCA2P51531 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
SMARCA2P51531 DUTP5-201ENST00000406790 469 ntBASIC10.15□□□□□ -0.78
SMARCA2P51531 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC10.15□□□□□ -0.78
SMARCA2P51531 AK3P5-201ENST00000432033 519 ntBASIC10.15□□□□□ -0.78
SMARCA2P51531 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC10.15□□□□□ -0.78
SMARCA2P51531 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC10.15□□□□□ -0.78
SMARCA2P51531 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC10.15□□□□□ -0.78
SMARCA2P51531 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
SMARCA2P51531 MIR4311-201ENST00000580794 100 ntBASIC10.15□□□□□ -0.78
SMARCA2P51531 AC087783.2-201ENST00000605070 562 ntBASIC10.15□□□□□ -0.78
SMARCA2P51531 AC004890.3-201ENST00000605566 1095 ntBASIC10.15□□□□□ -0.78
SMARCA2P51531 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC10.15□□□□□ -0.78
SMARCA2P51531 AC130448.2-201ENST00000624082 374 ntBASIC10.15□□□□□ -0.78
SMARCA2P51531 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SMARCA2P51531 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
SMARCA2P51531 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
SMARCA2P51531 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
SMARCA2P51531 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SMARCA2P51531 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
SMARCA2P51531 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC10.15□□□□□ -0.79
SMARCA2P51531 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA2P51531 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA2P51531 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
SMARCA2P51531 AL353763.1-201ENST00000624467 1628 ntBASIC10.14□□□□□ -0.79
SMARCA2P51531 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA2P51531 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC10.14□□□□□ -0.79
SMARCA2P51531 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA2P51531 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA2P51531 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC10.14□□□□□ -0.79
SMARCA2P51531 DSTNP5-201ENST00000427921 523 ntBASIC10.14□□□□□ -0.79
SMARCA2P51531 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA2P51531 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC10.14□□□□□ -0.79
SMARCA2P51531 AC006058.1-201ENST00000568686 5067 ntBASIC10.14□□□□□ -0.79
SMARCA2P51531 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
SMARCA2P51531 DCAF5-205ENST00000554215 4803 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA2P51531 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
SMARCA2P51531 AC119674.1-213ENST00000641177 1386 ntBASIC10.14□□□□□ -0.79
SMARCA2P51531 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA2P51531 AP003119.3-201ENST00000566747 4192 ntBASIC10.14□□□□□ -0.79
SMARCA2P51531 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA2P51531 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC10.14□□□□□ -0.79
SMARCA2P51531 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
SMARCA2P51531 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
SMARCA2P51531 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SMARCA2P51531 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
SMARCA2P51531 AL356967.1-201ENST00000406305 431 ntBASIC10.14□□□□□ -0.79
SMARCA2P51531 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC10.14□□□□□ -0.79
SMARCA2P51531 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC10.14□□□□□ -0.79
SMARCA2P51531 ACA64.4-201ENST00000459070 127 ntBASIC10.14□□□□□ -0.79
SMARCA2P51531 BMPR1APS2-201ENST00000527904 1012 ntBASIC10.14□□□□□ -0.79
SMARCA2P51531 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC10.14□□□□□ -0.79
SMARCA2P51531 CDC42EP3P1-201ENST00000601004 764 ntBASIC10.14□□□□□ -0.79
SMARCA2P51531 DNAH9-201ENST00000262442 13750 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA2P51531 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA2P51531 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA2P51531 PLEKHG4B-201ENST00000283426 11515 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA2P51531 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA2P51531 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA2P51531 MALAT1-202ENST00000534336 8708 ntBASIC10.13□□□□□ -0.79
SMARCA2P51531 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC10.13□□□□□ -0.79
SMARCA2P51531 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SMARCA2P51531 PARN-201ENST00000341484 2100 ntTSL 2 BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms