Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA1P49639 MIR301B-201ENST00000390813 78 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
HOXA1P49639 RPL5P20-201ENST00000403848 896 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AL079341.1-201ENST00000404701 1207 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 SOD1P1-201ENST00000407803 440 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 NFU1P1-201ENST00000413128 774 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA1P49639 AL161742.1-201ENST00000418154 584 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 RPL23AP85-201ENST00000421838 433 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXA1P49639 AL392003.1-201ENST00000434394 243 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 MTND2P40-201ENST00000436718 841 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA1P49639 KRT8P51-201ENST00000438938 274 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AC239800.1-201ENST00000442049 719 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 RPS10P18-201ENST00000442662 495 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AC079922.1-201ENST00000443291 359 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AL353803.3-201ENST00000444641 335 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 MTND5P8-201ENST00000449817 1083 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC103563.5-201ENST00000455643 364 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AC112187.1-201ENST00000455837 479 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 RN7SL188P-201ENST00000469842 285 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC104629.1-201ENST00000494226 508 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 RPL19P11-201ENST00000495944 589 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA1P49639 ST13P12-201ENST00000508958 1094 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
HOXA1P49639 HMGN1P15-201ENST00000513870 295 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA1P49639 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
HOXA1P49639 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA1P49639 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA1P49639 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.16□□□□□ -1.58
HOXA1P49639 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA1P49639 OR4H6P-201ENST00000563771 921 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC126323.4-201ENST00000566935 234 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AC090651.1-201ENST00000567865 634 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA1P49639 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC091133.5-201ENST00000603088 301 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC074276.2-201ENST00000619891 348 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC135068.11-201ENST00000636378 921 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA1P49639 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA1P49639 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA1P49639 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA1P49639 PSMC1P6-201ENST00000477233 1319 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC022164.1-201ENST00000568767 2673 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA1P49639 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
HOXA1P49639 AC092701.1-201ENST00000623627 1551 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.16□□□□□ -1.58
HOXA1P49639 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
HOXA1P49639 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.16□□□□□ -1.58
HOXA1P49639 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA1P49639 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA1P49639 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
HOXA1P49639 SAGE3P-201ENST00000619800 1635 ntBASIC5.15□□□□□ -1.58
HOXA1P49639 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.15□□□□□ -1.58
HOXA1P49639 AC119674.1-202ENST00000641333 1860 ntBASIC5.15□□□□□ -1.58
HOXA1P49639 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXA1P49639 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.15□□□□□ -1.58
HOXA1P49639 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.15□□□□□ -1.58
HOXA1P49639 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
HOXA1P49639 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.15□□□□□ -1.58
HOXA1P49639 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
HOXA1P49639 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.15□□□□□ -1.58
HOXA1P49639 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA1P49639 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HOXA1P49639 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HOXA1P49639 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
HOXA1P49639 RNU4-39P-201ENST00000362455 127 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 RNU6-249P-201ENST00000363016 102 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 RNU6-1331P-201ENST00000363658 106 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 RN7SKP130-201ENST00000364924 301 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
HOXA1P49639 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.15□□□□□ -1.59
HOXA1P49639 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA1P49639 AC096644.3-201ENST00000416788 338 ntBASIC5.15□□□□□ -1.59
HOXA1P49639 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms