Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC083795.1-201ENST00000491760 320 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 AC009879.1-201ENST00000520029 839 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PTPN9P43378 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.29□□□□□ -1.4
PTPN9P43378 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.29□□□□□ -1.4
PTPN9P43378 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.29□□□□□ -1.4
PTPN9P43378 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.29□□□□□ -1.4
PTPN9P43378 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.29□□□□□ -1.4
PTPN9P43378 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 TMF1P1-201ENST00000576058 373 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.29□□□□□ -1.4
PTPN9P43378 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PTPN9P43378 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.29□□□□□ -1.4
PTPN9P43378 AC104307.1-201ENST00000616142 196 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 AL355974.3-201ENST00000617383 467 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 AL596275.2-207ENST00000641188 675 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 AC123769.1-201ENST00000530992 3192 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.29□□□□□ -1.4
PTPN9P43378 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 THAP12P9-201ENST00000503971 2360 ntBASIC6.29□□□□□ -1.4
PTPN9P43378 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.29□□□□□ -1.4
PTPN9P43378 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PTPN9P43378 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.28□□□□□ -1.4
PTPN9P43378 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PTPN9P43378 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.28□□□□□ -1.4
PTPN9P43378 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 ZNF101P1-201ENST00000435701 1720 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PTPN9P43378 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.28□□□□□ -1.4
PTPN9P43378 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 SNORD1C-201ENST00000363315 78 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 AL139039.2-201ENST00000407436 479 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.28□□□□□ -1.4
PTPN9P43378 RPS26P38-201ENST00000414476 348 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 MTND4LP21-201ENST00000415303 295 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.28□□□□□ -1.4
PTPN9P43378 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 RNU7-157P-201ENST00000459600 66 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.28□□□□□ -1.4
PTPN9P43378 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.28□□□□□ -1.4
PTPN9P43378 RN7SKP35-201ENST00000517210 151 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC6.28□□□□□ -1.4
PTPN9P43378 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PTPN9P43378 IGKV3D-25-201ENST00000519599 235 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.28□□□□□ -1.4
PTPN9P43378 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.28□□□□□ -1.4
PTPN9P43378 AL845552.1-201ENST00000556820 323 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 AC026826.3-201ENST00000561747 158 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.28□□□□□ -1.4
PTPN9P43378 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.28□□□□□ -1.4
PTPN9P43378 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.28□□□□□ -1.4
PTPN9P43378 AC009779.8-202ENST00000607990 932 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 AC004801.6-201ENST00000616571 978 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 AC069234.4-201ENST00000621276 412 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 AL683826.1-201ENST00000624104 627 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.28□□□□□ -1.4
PTPN9P43378 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.28□□□□□ -1.4
PTPN9P43378 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
PTPN9P43378 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 AC008627.1-201ENST00000517511 1704 ntBASIC6.28□□□□□ -1.4
PTPN9P43378 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PTPN9P43378 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.27□□□□□ -1.4
PTPN9P43378 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.4
PTPN9P43378 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 AL137058.3-201ENST00000624531 3099 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.27□□□□□ -1.41
PTPN9P43378 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.27□□□□□ -1.41
PTPN9P43378 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.27□□□□□ -1.41
PTPN9P43378 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 RNA5SP211-201ENST00000365516 117 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.27□□□□□ -1.41
PTPN9P43378 SETP10-201ENST00000424368 814 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 AC106901.1-201ENST00000425086 698 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.27□□□□□ -1.41
PTPN9P43378 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.27□□□□□ -1.41
PTPN9P43378 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.27□□□□□ -1.41
PTPN9P43378 AL445466.1-201ENST00000448432 357 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 AC118758.1-202ENST00000454719 225 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms