Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RPL6P30-201ENST00000443382 862 ntBASIC5.9□□□□□ -1.46
RPA3P35244 ZNF619P1-201ENST00000446539 752 ntBASIC5.9□□□□□ -1.46
RPA3P35244 OR7E99P-201ENST00000505750 922 ntBASIC5.9□□□□□ -1.46
RPA3P35244 MIR2117-201ENST00000516780 80 ntBASIC5.9□□□□□ -1.46
RPA3P35244 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.9□□□□□ -1.46
RPA3P35244 OR56A7P-201ENST00000524865 941 ntBASIC5.9□□□□□ -1.46
RPA3P35244 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.9□□□□□ -1.46
RPA3P35244 AL121594.2-201ENST00000541658 472 ntBASIC5.9□□□□□ -1.46
RPA3P35244 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.9□□□□□ -1.46
RPA3P35244 AC023310.2-201ENST00000553844 547 ntBASIC5.9□□□□□ -1.46
RPA3P35244 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.9□□□□□ -1.46
RPA3P35244 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPA3P35244 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.9□□□□□ -1.46
RPA3P35244 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.9□□□□□ -1.46
RPA3P35244 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.9□□□□□ -1.46
RPA3P35244 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.9□□□□□ -1.46
RPA3P35244 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
RPA3P35244 AC097641.3-201ENST00000613523 464 ntBASIC5.9□□□□□ -1.46
RPA3P35244 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.9□□□□□ -1.46
RPA3P35244 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
RPA3P35244 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
RPA3P35244 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
RPA3P35244 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
RPA3P35244 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.9□□□□□ -1.47
RPA3P35244 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
RPA3P35244 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.9□□□□□ -1.47
RPA3P35244 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 MTCO1P28-201ENST00000574177 1528 ntBASIC5.89□□□□□ -1.47
RPA3P35244 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
RPA3P35244 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.89□□□□□ -1.47
RPA3P35244 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPA3P35244 RNA5SP110-201ENST00000362638 115 ntBASIC5.89□□□□□ -1.47
RPA3P35244 RN7SKP187-201ENST00000365536 330 ntBASIC5.89□□□□□ -1.47
RPA3P35244 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RPA3P35244 RPL11P3-201ENST00000395256 523 ntBASIC5.89□□□□□ -1.47
RPA3P35244 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.89□□□□□ -1.47
RPA3P35244 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.89□□□□□ -1.47
RPA3P35244 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.89□□□□□ -1.47
RPA3P35244 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.89□□□□□ -1.47
RPA3P35244 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RPA3P35244 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.89□□□□□ -1.47
RPA3P35244 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.89□□□□□ -1.47
RPA3P35244 AC096775.1-201ENST00000437724 448 ntBASIC5.89□□□□□ -1.47
RPA3P35244 AL663074.2-201ENST00000440621 479 ntBASIC5.89□□□□□ -1.47
RPA3P35244 MED28P3-201ENST00000444288 531 ntBASIC5.89□□□□□ -1.47
RPA3P35244 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 REG1CP-206ENST00000447469 496 ntBASIC5.89□□□□□ -1.47
RPA3P35244 AC068491.1-201ENST00000449539 1241 ntBASIC5.89□□□□□ -1.47
RPA3P35244 AC016027.4-201ENST00000450866 277 ntBASIC5.89□□□□□ -1.47
RPA3P35244 AC098847.1-201ENST00000473094 348 ntBASIC5.89□□□□□ -1.47
RPA3P35244 OR7E157P-201ENST00000494376 911 ntBASIC5.89□□□□□ -1.47
RPA3P35244 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.89□□□□□ -1.47
RPA3P35244 GLUD1P3-202ENST00000508551 200 ntBASIC5.89□□□□□ -1.47
RPA3P35244 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.89□□□□□ -1.47
RPA3P35244 AC011853.1-201ENST00000518911 454 ntBASIC5.89□□□□□ -1.47
RPA3P35244 AC009879.1-201ENST00000520029 839 ntBASIC5.89□□□□□ -1.47
RPA3P35244 AC084824.2-201ENST00000548906 345 ntBASIC5.89□□□□□ -1.47
RPA3P35244 AC026826.3-201ENST00000561747 158 ntBASIC5.89□□□□□ -1.47
RPA3P35244 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.89□□□□□ -1.47
RPA3P35244 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RPA3P35244 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.89□□□□□ -1.47
RPA3P35244 AC091167.5-201ENST00000605689 894 ntBASIC5.89□□□□□ -1.47
RPA3P35244 AL645933.2-201ENST00000606743 1207 ntBASIC5.89□□□□□ -1.47
RPA3P35244 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.89□□□□□ -1.47
RPA3P35244 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.89□□□□□ -1.47
RPA3P35244 AC016745.2-201ENST00000608834 3443 ntBASIC5.89□□□□□ -1.47
RPA3P35244 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
RPA3P35244 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
RPA3P35244 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
RPA3P35244 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
RPA3P35244 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.89□□□□□ -1.47
RPA3P35244 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.89□□□□□ -1.47
RPA3P35244 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.88□□□□□ -1.47
RPA3P35244 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
RPA3P35244 AC093671.1-201ENST00000624981 2929 ntBASIC5.88□□□□□ -1.47
RPA3P35244 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPA3P35244 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.88□□□□□ -1.47
RPA3P35244 MFSD8-239ENST00000641590 2479 ntBASIC5.88□□□□□ -1.47
RPA3P35244 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPA3P35244 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.88□□□□□ -1.47
RPA3P35244 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPA3P35244 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPA3P35244 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPA3P35244 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPA3P35244 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
RPA3P35244 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
RPA3P35244 RN7SKP78-201ENST00000364711 318 ntBASIC5.88□□□□□ -1.47
RPA3P35244 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.88□□□□□ -1.47
RPA3P35244 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms