Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
MMP3P08254 RN7SKP160-201ENST00000363804 340 ntBASIC6.58□□□□□ -1.36
MMP3P08254 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MMP3P08254 NME1P1-201ENST00000420914 382 ntBASIC6.58□□□□□ -1.36
MMP3P08254 HMGB3P24-201ENST00000433260 622 ntBASIC6.58□□□□□ -1.36
MMP3P08254 FABP5P2-201ENST00000439042 408 ntBASIC6.58□□□□□ -1.36
MMP3P08254 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.58□□□□□ -1.36
MMP3P08254 OR7L1P-201ENST00000456181 380 ntBASIC6.58□□□□□ -1.36
MMP3P08254 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.58□□□□□ -1.36
MMP3P08254 AC022215.1-201ENST00000481770 362 ntBASIC6.58□□□□□ -1.36
MMP3P08254 AC099521.1-201ENST00000482557 334 ntBASIC6.58□□□□□ -1.36
MMP3P08254 EIF3LP3-201ENST00000495197 822 ntBASIC6.58□□□□□ -1.36
MMP3P08254 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.58□□□□□ -1.36
MMP3P08254 SNORA43.3-201ENST00000517240 103 ntBASIC6.58□□□□□ -1.36
MMP3P08254 AC007494.1-201ENST00000562293 760 ntBASIC6.58□□□□□ -1.36
MMP3P08254 DPPA2P4-201ENST00000563717 878 ntBASIC6.58□□□□□ -1.36
MMP3P08254 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.58□□□□□ -1.36
MMP3P08254 GARSP1-201ENST00000570895 719 ntBASIC6.58□□□□□ -1.36
MMP3P08254 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.58□□□□□ -1.36
MMP3P08254 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.58□□□□□ -1.36
MMP3P08254 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.58□□□□□ -1.36
MMP3P08254 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.58□□□□□ -1.36
MMP3P08254 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
MMP3P08254 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MMP3P08254 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.58□□□□□ -1.36
MMP3P08254 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
MMP3P08254 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MMP3P08254 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
MMP3P08254 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MMP3P08254 AC010329.1-201ENST00000593903 8328 ntBASIC6.58□□□□□ -1.36
MMP3P08254 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
MMP3P08254 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
MMP3P08254 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.58□□□□□ -1.36
MMP3P08254 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
MMP3P08254 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.58□□□□□ -1.36
MMP3P08254 BRD7P6-201ENST00000431406 1860 ntBASIC6.58□□□□□ -1.36
MMP3P08254 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
MMP3P08254 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
MMP3P08254 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
MMP3P08254 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
MMP3P08254 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
MMP3P08254 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.57□□□□□ -1.36
MMP3P08254 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.57□□□□□ -1.36
MMP3P08254 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
MMP3P08254 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
MMP3P08254 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
MMP3P08254 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.57□□□□□ -1.36
MMP3P08254 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.57□□□□□ -1.36
MMP3P08254 MTND3P20-201ENST00000407663 186 ntBASIC6.57□□□□□ -1.36
MMP3P08254 RN7SKP278-201ENST00000410504 342 ntBASIC6.57□□□□□ -1.36
MMP3P08254 MYL6P5-201ENST00000412707 459 ntBASIC6.57□□□□□ -1.36
MMP3P08254 AL596448.1-201ENST00000415024 392 ntBASIC6.57□□□□□ -1.36
MMP3P08254 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP3P08254 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.57□□□□□ -1.36
MMP3P08254 CLUHP1-201ENST00000435012 1190 ntBASIC6.57□□□□□ -1.36
MMP3P08254 RPS12P17-201ENST00000438591 377 ntBASIC6.57□□□□□ -1.36
MMP3P08254 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP3P08254 MYO5BP2-201ENST00000449815 1277 ntBASIC6.57□□□□□ -1.36
MMP3P08254 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP3P08254 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP3P08254 AC007386.1-201ENST00000455212 582 ntBASIC6.57□□□□□ -1.36
MMP3P08254 AL157777.1-201ENST00000468100 304 ntBASIC6.57□□□□□ -1.36
MMP3P08254 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.57□□□□□ -1.36
MMP3P08254 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.57□□□□□ -1.36
MMP3P08254 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
MMP3P08254 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 OR4A42P-201ENST00000531397 938 ntBASIC6.57□□□□□ -1.36
MMP3P08254 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC6.57□□□□□ -1.36
MMP3P08254 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.57□□□□□ -1.36
MMP3P08254 AC011497.2-201ENST00000600255 639 ntBASIC6.57□□□□□ -1.36
MMP3P08254 AC027334.1-201ENST00000603257 310 ntBASIC6.57□□□□□ -1.36
MMP3P08254 AL021368.1-201ENST00000607490 540 ntBASIC6.57□□□□□ -1.36
MMP3P08254 AC239803.2-201ENST00000610161 430 ntBASIC6.57□□□□□ -1.36
MMP3P08254 AL445670.1-201ENST00000618889 801 ntBASIC6.57□□□□□ -1.36
MMP3P08254 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.57□□□□□ -1.36
MMP3P08254 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.57□□□□□ -1.36
MMP3P08254 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
MMP3P08254 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
MMP3P08254 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MMP3P08254 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP3P08254 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
MMP3P08254 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
MMP3P08254 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms