Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RPS7P3-201ENST00000443360 580 ntBASIC5.45□□□□□ -1.54
P04436 ACA64.4-201ENST00000459070 127 ntBASIC5.45□□□□□ -1.54
P04436 AC011476.1-201ENST00000466725 307 ntBASIC5.45□□□□□ -1.54
P04436 RN7SL57P-201ENST00000493687 290 ntBASIC5.45□□□□□ -1.54
P04436 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
P04436 AC111000.5-201ENST00000506559 1178 ntBASIC5.45□□□□□ -1.54
P04436 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.45□□□□□ -1.54
P04436 RNA5SP116-201ENST00000516132 98 ntBASIC5.45□□□□□ -1.54
P04436 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.45□□□□□ -1.54
P04436 IGKV2-4-201ENST00000523070 340 ntBASIC5.45□□□□□ -1.54
P04436 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.45□□□□□ -1.54
P04436 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.45□□□□□ -1.54
P04436 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.45□□□□□ -1.54
P04436 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.45□□□□□ -1.54
P04436 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.45□□□□□ -1.54
P04436 AC018558.5-201ENST00000565840 952 ntBASIC5.45□□□□□ -1.54
P04436 MIR132-201ENST00000591554 101 ntBASIC5.45□□□□□ -1.54
P04436 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
P04436 COX6CP7-201ENST00000597056 208 ntBASIC5.45□□□□□ -1.54
P04436 AC004890.3-201ENST00000605566 1095 ntBASIC5.45□□□□□ -1.54
P04436 AL157762.1-201ENST00000619612 415 ntBASIC5.45□□□□□ -1.54
P04436 ICE2P1-201ENST00000512800 1849 ntBASIC5.45□□□□□ -1.54
P04436 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
P04436 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
P04436 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
P04436 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
P04436 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.45□□□□□ -1.54
P04436 MTCO1P46-201ENST00000451639 1491 ntBASIC5.45□□□□□ -1.54
P04436 NEPNP-201ENST00000404786 1371 ntBASIC5.44□□□□□ -1.54
P04436 PDZK1P1-202ENST00000425209 1350 ntBASIC5.44□□□□□ -1.54
P04436 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
P04436 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
P04436 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P04436 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P04436 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.44□□□□□ -1.54
P04436 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P04436 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P04436 OR52B3P-201ENST00000314715 928 ntBASIC5.44□□□□□ -1.54
P04436 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P04436 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
P04436 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
P04436 AL360271.1-201ENST00000395679 510 ntBASIC5.44□□□□□ -1.54
P04436 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.44□□□□□ -1.54
P04436 AL096711.1-201ENST00000404780 554 ntBASIC5.44□□□□□ -1.54
P04436 EEF1B2P8-201ENST00000414101 671 ntBASIC5.44□□□□□ -1.54
P04436 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.44□□□□□ -1.54
P04436 KIF4CP-201ENST00000422742 1279 ntBASIC5.44□□□□□ -1.54
P04436 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P04436 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.44□□□□□ -1.54
P04436 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.44□□□□□ -1.54
P04436 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.44□□□□□ -1.54
P04436 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.44□□□□□ -1.54
P04436 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.44□□□□□ -1.54
P04436 PCBP2P1-201ENST00000437262 977 ntBASIC5.44□□□□□ -1.54
P04436 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.44□□□□□ -1.54
P04436 CUBNP2-201ENST00000443534 1139 ntBASIC5.44□□□□□ -1.54
P04436 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.44□□□□□ -1.54
P04436 AP006222.1-205ENST00000450734 457 ntBASIC5.44□□□□□ -1.54
P04436 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.44□□□□□ -1.54
P04436 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P04436 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.44□□□□□ -1.54
P04436 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.44□□□□□ -1.54
P04436 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.44□□□□□ -1.54
P04436 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.44□□□□□ -1.54
P04436 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
P04436 AL139099.4-201ENST00000614802 114 ntBASIC5.44□□□□□ -1.54
P04436 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.44□□□□□ -1.54
P04436 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.44□□□□□ -1.54
P04436 OR8G3P-202ENST00000641572 1255 ntBASIC5.44□□□□□ -1.54
P04436 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
P04436 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
P04436 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC5.44□□□□□ -1.54
P04436 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P04436 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
P04436 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.44□□□□□ -1.54
P04436 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
P04436 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.44□□□□□ -1.54
P04436 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
P04436 CDY11P-201ENST00000447168 1651 ntBASIC5.43□□□□□ -1.54
P04436 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
P04436 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
P04436 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
P04436 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
P04436 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
P04436 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
P04436 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
P04436 AC005261.2-201ENST00000593427 4258 ntBASIC5.43□□□□□ -1.54
P04436 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
P04436 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
P04436 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
P04436 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
P04436 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
P04436 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.43□□□□□ -1.54
P04436 RPS3AP2-201ENST00000407190 754 ntBASIC5.43□□□□□ -1.54
P04436 NACAP7-201ENST00000407371 609 ntBASIC5.43□□□□□ -1.54
P04436 AL731534.1-201ENST00000434711 269 ntBASIC5.43□□□□□ -1.54
P04436 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.43□□□□□ -1.54
P04436 AL162739.1-201ENST00000450606 307 ntBASIC5.43□□□□□ -1.54
P04436 SNORD46.2-201ENST00000516021 102 ntBASIC5.43□□□□□ -1.54
P04436 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms