Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 LINC02019-201ENST00000608605 2060 ntBASIC4.96□□□□□ -1.61
CD74P04233 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CD74P04233 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
CD74P04233 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.96□□□□□ -1.61
CD74P04233 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
CD74P04233 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CD74P04233 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD74P04233 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CD74P04233 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.96□□□□□ -1.62
CD74P04233 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.96□□□□□ -1.62
CD74P04233 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.96□□□□□ -1.62
CD74P04233 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
CD74P04233 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD74P04233 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CD74P04233 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.96□□□□□ -1.62
CD74P04233 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC4.96□□□□□ -1.62
CD74P04233 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.96□□□□□ -1.62
CD74P04233 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.96□□□□□ -1.62
CD74P04233 VN1R21P-201ENST00000426703 765 ntBASIC4.96□□□□□ -1.62
CD74P04233 AC099677.3-201ENST00000427081 395 ntBASIC4.96□□□□□ -1.62
CD74P04233 AL645939.3-201ENST00000435408 225 ntBASIC4.96□□□□□ -1.62
CD74P04233 RPS10P18-201ENST00000442662 495 ntBASIC4.96□□□□□ -1.62
CD74P04233 AC097359.1-201ENST00000447946 463 ntBASIC4.96□□□□□ -1.62
CD74P04233 OR52I1-201ENST00000450052 1050 ntBASIC4.96□□□□□ -1.62
CD74P04233 RN7SL372P-201ENST00000461982 298 ntBASIC4.96□□□□□ -1.62
CD74P04233 GM2AP2-201ENST00000491764 562 ntBASIC4.96□□□□□ -1.62
CD74P04233 RN7SL104P-201ENST00000498686 293 ntBASIC4.96□□□□□ -1.62
CD74P04233 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC4.96□□□□□ -1.62
CD74P04233 SETP21-201ENST00000514799 892 ntBASIC4.96□□□□□ -1.62
CD74P04233 MRPS5P3-201ENST00000515577 166 ntBASIC4.96□□□□□ -1.62
CD74P04233 RNA5SP206-201ENST00000516703 121 ntBASIC4.96□□□□□ -1.62
CD74P04233 AC113191.1-201ENST00000517759 403 ntBASIC4.96□□□□□ -1.62
CD74P04233 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.96□□□□□ -1.62
CD74P04233 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC4.96□□□□□ -1.62
CD74P04233 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.96□□□□□ -1.62
CD74P04233 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.96□□□□□ -1.62
CD74P04233 RN7SL32P-201ENST00000580514 281 ntBASIC4.96□□□□□ -1.62
CD74P04233 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.96□□□□□ -1.62
CD74P04233 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.96□□□□□ -1.62
CD74P04233 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC4.96□□□□□ -1.62
CD74P04233 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.96□□□□□ -1.62
CD74P04233 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.96□□□□□ -1.62
CD74P04233 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CD74P04233 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC4.96□□□□□ -1.62
CD74P04233 OR8A1-204ENST00000642111 1145 ntBASIC4.96□□□□□ -1.62
CD74P04233 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CD74P04233 AC007938.2-201ENST00000604666 2634 ntBASIC4.96□□□□□ -1.62
CD74P04233 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.62
CD74P04233 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.96□□□□□ -1.62
CD74P04233 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CD74P04233 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CD74P04233 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
CD74P04233 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CD74P04233 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.96□□□□□ -1.62
CD74P04233 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD74P04233 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD74P04233 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD74P04233 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CD74P04233 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CD74P04233 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD74P04233 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD74P04233 RBMY1HP-201ENST00000382759 1389 ntBASIC4.95□□□□□ -1.62
CD74P04233 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD74P04233 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CD74P04233 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CD74P04233 RN7SKP184-201ENST00000362348 333 ntBASIC4.95□□□□□ -1.62
CD74P04233 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC4.95□□□□□ -1.62
CD74P04233 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.95□□□□□ -1.62
CD74P04233 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CD74P04233 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD74P04233 MIR551B-201ENST00000384984 96 ntBASIC4.95□□□□□ -1.62
CD74P04233 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD74P04233 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CD74P04233 AL157702.1-201ENST00000398764 426 ntBASIC4.95□□□□□ -1.62
CD74P04233 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CD74P04233 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC4.95□□□□□ -1.62
CD74P04233 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC4.95□□□□□ -1.62
CD74P04233 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.95□□□□□ -1.62
CD74P04233 AC009784.1-201ENST00000426484 460 ntBASIC4.95□□□□□ -1.62
CD74P04233 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.95□□□□□ -1.62
CD74P04233 AC108479.1-201ENST00000431142 427 ntBASIC4.95□□□□□ -1.62
CD74P04233 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.95□□□□□ -1.62
CD74P04233 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.95□□□□□ -1.62
CD74P04233 GAPDHP37-201ENST00000442317 968 ntBASIC4.95□□□□□ -1.62
CD74P04233 BMS1P11-201ENST00000442351 885 ntBASIC4.95□□□□□ -1.62
CD74P04233 OR2L9P-201ENST00000444456 913 ntBASIC4.95□□□□□ -1.62
CD74P04233 AC016027.4-201ENST00000450866 277 ntBASIC4.95□□□□□ -1.62
CD74P04233 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.95□□□□□ -1.62
CD74P04233 BMS1P9-201ENST00000457640 885 ntBASIC4.95□□□□□ -1.62
CD74P04233 SNORD125-201ENST00000459538 96 ntBASIC4.95□□□□□ -1.62
CD74P04233 RPL34P33-201ENST00000486062 334 ntBASIC4.95□□□□□ -1.62
CD74P04233 RPL9P15-201ENST00000491096 532 ntBASIC4.95□□□□□ -1.62
CD74P04233 LDHBP3-201ENST00000514909 822 ntBASIC4.95□□□□□ -1.62
CD74P04233 SEPT10P1-201ENST00000517342 1162 ntBASIC4.95□□□□□ -1.62
CD74P04233 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.95□□□□□ -1.62
CD74P04233 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.95□□□□□ -1.62
CD74P04233 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC4.95□□□□□ -1.62
CD74P04233 HMGN1P26-201ENST00000558737 303 ntBASIC4.95□□□□□ -1.62
CD74P04233 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CD74P04233 AC005479.3-201ENST00000602790 431 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms