Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 DNAJA1P4-201ENST00000406473 1166 ntBASIC7.25□□□□□ -1.25
RGPD3A6NKT7 NIFKP3-201ENST00000417799 865 ntBASIC7.25□□□□□ -1.25
RGPD3A6NKT7 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 AL022237.1-201ENST00000446663 358 ntBASIC7.25□□□□□ -1.25
RGPD3A6NKT7 RPS29P33-201ENST00000456717 146 ntBASIC7.25□□□□□ -1.25
RGPD3A6NKT7 RPL23AP40-201ENST00000487630 390 ntBASIC7.25□□□□□ -1.25
RGPD3A6NKT7 RPL37AP8-201ENST00000494116 276 ntBASIC7.25□□□□□ -1.25
RGPD3A6NKT7 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 AC074255.1-201ENST00000511259 501 ntBASIC7.25□□□□□ -1.25
RGPD3A6NKT7 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 MIR3934-201ENST00000579806 107 ntBASIC7.25□□□□□ -1.25
RGPD3A6NKT7 AC005084.1-201ENST00000605160 304 ntBASIC7.25□□□□□ -1.25
RGPD3A6NKT7 CYP4F35P-202ENST00000636121 390 ntBASIC7.25□□□□□ -1.25
RGPD3A6NKT7 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
RGPD3A6NKT7 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 MAPK10-365ENST00000641902 3825 ntBASIC7.24□□□□□ -1.25
RGPD3A6NKT7 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 AC068138.1-201ENST00000412635 217 ntBASIC7.24□□□□□ -1.25
RGPD3A6NKT7 AL049745.1-201ENST00000433953 286 ntBASIC7.24□□□□□ -1.25
RGPD3A6NKT7 HNRNPDLP2-201ENST00000455248 751 ntBASIC7.24□□□□□ -1.25
RGPD3A6NKT7 RN7SL385P-201ENST00000468873 276 ntBASIC7.24□□□□□ -1.25
RGPD3A6NKT7 MIR5095-201ENST00000578844 88 ntBASIC7.24□□□□□ -1.25
RGPD3A6NKT7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 AC109583.2-201ENST00000617367 129 ntBASIC7.24□□□□□ -1.25
RGPD3A6NKT7 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 AC012618.3-205ENST00000637896 1496 ntBASIC7.24□□□□□ -1.25
RGPD3A6NKT7 AL136531.3-201ENST00000624378 3658 ntBASIC7.24□□□□□ -1.25
RGPD3A6NKT7 CASC19-281ENST00000642118 1554 ntBASIC7.24□□□□□ -1.25
RGPD3A6NKT7 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 AL031651.1-201ENST00000615357 1438 ntBASIC7.24□□□□□ -1.25
RGPD3A6NKT7 IMMTP1-201ENST00000435590 2219 ntBASIC7.24□□□□□ -1.25
RGPD3A6NKT7 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC7.24□□□□□ -1.25
RGPD3A6NKT7 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 RNU1-149P-201ENST00000390870 161 ntBASIC7.23□□□□□ -1.25
RGPD3A6NKT7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.23□□□□□ -1.25
RGPD3A6NKT7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 TRY2P-201ENST00000448860 689 ntBASIC7.23□□□□□ -1.25
RGPD3A6NKT7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 AC105384.2-201ENST00000508433 640 ntBASIC7.23□□□□□ -1.25
RGPD3A6NKT7 RNU6-941P-201ENST00000516346 108 ntBASIC7.23□□□□□ -1.25
RGPD3A6NKT7 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 MIR5096-201ENST00000583713 70 ntBASIC7.23□□□□□ -1.25
RGPD3A6NKT7 AL353662.3-201ENST00000625131 237 ntBASIC7.23□□□□□ -1.25
RGPD3A6NKT7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 RNU6ATAC21P-201ENST00000408656 126 ntBASIC7.23□□□□□ -1.25
RGPD3A6NKT7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 AL133482.1-201ENST00000415988 498 ntBASIC7.23□□□□□ -1.25
RGPD3A6NKT7 FAM96AP1-201ENST00000430879 482 ntBASIC7.23□□□□□ -1.25
RGPD3A6NKT7 AL162739.1-201ENST00000450606 307 ntBASIC7.23□□□□□ -1.25
RGPD3A6NKT7 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 AC024255.1-201ENST00000614376 102 ntBASIC7.23□□□□□ -1.25
RGPD3A6NKT7 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
RGPD3A6NKT7 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RGPD3A6NKT7 PDCD6IP-201ENST00000307296 6161 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
RGPD3A6NKT7 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 138 ms