Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AL357093.2-202ENST00000556942 498 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 DRAIC-204ENST00000558781 1222 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 HMGB3P26-201ENST00000560051 582 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 LINC01926-201ENST00000589476 478 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC011447.2-201ENST00000592921 283 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 ZNF257-207ENST00000600162 817 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC108451.2-201ENST00000603875 538 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 CHCHD2P11-201ENST00000604283 457 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC019257.2-201ENST00000605539 497 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC113361.1-201ENST00000606683 543 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AL109933.4-201ENST00000612111 157 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AL354740.1-202ENST00000612837 290 ntTSL 3 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 MIR6085-201ENST00000618314 110 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC079456.1-201ENST00000624010 480 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC010223.1-201ENST00000625092 279 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AC073488.3-201ENST00000631611 778 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 MAPK10-303ENST00000641324 3959 ntBASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
LINC01558Q9Y6Z2 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 MFAP3L-202ENST00000393702 1505 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 AC063976.2-201ENST00000425667 3556 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 RNU1-108P-201ENST00000362556 161 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 RNA5SP223-201ENST00000365174 120 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 COX7A2-201ENST00000370081 914 ntAPPRIS P2 TSL 3 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 NEK10-203ENST00000383770 1257 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 AL031864.1-201ENST00000392075 423 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 AAMDC-202ENST00000393427 531 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 AC024937.2-201ENST00000411669 1242 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 LINC00424-201ENST00000413124 654 ntTSL 4 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 SNRPBP1-201ENST00000443634 282 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 RPL18AP2-201ENST00000450007 482 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 NPAP1P2-201ENST00000456716 1234 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 AC108751.2-201ENST00000469993 231 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 RN7SL654P-201ENST00000479178 292 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 RN7SL152P-201ENST00000484176 298 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 RPL38P3-201ENST00000484463 213 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 RPS7P6-201ENST00000485777 579 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 RPL9P15-201ENST00000491096 532 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 RN7SL862P-201ENST00000491550 298 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 RPS6P4-201ENST00000494693 758 ntBASIC2.88□□□□□ -1.95
LINC01558Q9Y6Z2 OR51K1P-201ENST00000510214 950 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms