Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RN7SL221P-201ENST00000466190 281 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC090568.1-201ENST00000509499 856 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC106800.3-201ENST00000511389 308 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 IGKV1D-22-201ENST00000518953 324 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 TOMM20P1-201ENST00000534518 427 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC005632.2-201ENST00000564271 828 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 OR1AB1P-201ENST00000585564 761 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC096947.1-201ENST00000603233 470 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC027449.1-201ENST00000608890 407 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AL050303.3-201ENST00000613704 284 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC111152.1-202ENST00000635848 339 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 CASC19-274ENST00000642018 970 ntBASIC6.44□□□□□ -1.38
DKK3Q9UBP4 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
DKK3Q9UBP4 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AP002370.1-201ENST00000528055 1602 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC027575.3-201ENST00000583058 2747 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AL136984.1-201ENST00000607611 1893 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC010401.2-201ENST00000575137 4934 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AL513548.1-201ENST00000562904 1724 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 MIR188-201ENST00000385034 86 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AL035405.1-201ENST00000400795 710 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 GTF2IP14-201ENST00000441415 586 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AL606517.1-201ENST00000446914 387 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 RARRES2P3-201ENST00000457739 473 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 RPL12P31-201ENST00000478433 450 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC113367.2-201ENST00000505749 160 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC091874.2-201ENST00000505889 720 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 COX6B1P4-201ENST00000519826 484 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC027026.1-201ENST00000532323 742 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 DCN-209ENST00000546745 1026 ntTSL 3 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AL078601.3-201ENST00000573303 535 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 OR1E3-201ENST00000575608 948 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 RN7SL475P-201ENST00000583379 298 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC027243.2-201ENST00000602530 724 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AL357094.1-201ENST00000603845 844 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 uc_338.31-201ENST00000615595 186 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AC026367.3-201ENST00000619032 590 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AP001962.1-201ENST00000624114 559 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
DKK3Q9UBP4 AP001284.1-201ENST00000528393 2118 ntBASIC6.43□□□□□ -1.38
DKK3Q9UBP4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
DKK3Q9UBP4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms