Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC092681.3-201ENST00000609463 678 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AL352984.2-201ENST00000611153 546 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AL591926.1-201ENST00000620542 217 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC069542.2-201ENST00000624816 216 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC000095.2-202ENST00000637415 154 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AL132656.3-201ENST00000606384 1595 ntBASIC6.18□□□□□ -1.42
PCDH9Q9HC56 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
PCDH9Q9HC56 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 DNM1P47-203ENST00000571780 12667 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AL449283.1-201ENST00000602631 3403 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AL132875.1-201ENST00000403623 949 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AL096829.1-201ENST00000413677 457 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AC017078.1-201ENST00000416146 368 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 RPL35AP31-201ENST00000418340 337 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AC244453.4-201ENST00000419150 388 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 UBE2V2P1-201ENST00000434717 398 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 MTND3P6-201ENST00000485242 339 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 OR56A7P-201ENST00000524865 941 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AC084121.1-201ENST00000533882 835 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AC007346.1-201ENST00000569208 867 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AL583832.1-201ENST00000603227 784 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 uc_338.26-201ENST00000612659 160 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 AL512652.1-201ENST00000619006 500 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 FAM27E2-201ENST00000619668 403 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 SNX18P12-201ENST00000624821 759 ntBASIC6.17□□□□□ -1.42
PCDH9Q9HC56 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDH9Q9HC56 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 RNU1-134P-201ENST00000362935 165 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 RNU1-65P-201ENST00000363919 148 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 RNA5SP211-201ENST00000365516 117 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 RPL7P58-201ENST00000402913 758 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 SNORA81-201ENST00000408493 178 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 NMD3P2-201ENST00000421815 761 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 SEPT14P12-201ENST00000442280 560 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 AC016027.4-201ENST00000450866 277 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 AC009879.1-201ENST00000520029 839 ntBASIC6.16□□□□□ -1.42
PCDH9Q9HC56 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PCDH9Q9HC56 AC023310.2-201ENST00000553844 547 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms