Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 AL035690.1-201ENST00000490892 383 ntBASIC6.4□□□□□ -1.38
USP29Q9HBJ7 GM2AP2-201ENST00000491764 562 ntBASIC6.4□□□□□ -1.38
USP29Q9HBJ7 ATG10-AS1-201ENST00000504846 648 ntBASIC6.4□□□□□ -1.38
USP29Q9HBJ7 RNA5SP400-201ENST00000517155 111 ntBASIC6.4□□□□□ -1.38
USP29Q9HBJ7 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
USP29Q9HBJ7 IGKV2-4-201ENST00000523070 340 ntBASIC6.4□□□□□ -1.38
USP29Q9HBJ7 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
USP29Q9HBJ7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.4□□□□□ -1.38
USP29Q9HBJ7 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC6.4□□□□□ -1.38
USP29Q9HBJ7 AC007494.1-201ENST00000562293 760 ntBASIC6.4□□□□□ -1.38
USP29Q9HBJ7 AC005726.4-201ENST00000582858 458 ntBASIC6.4□□□□□ -1.38
USP29Q9HBJ7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.4□□□□□ -1.38
USP29Q9HBJ7 AL591167.1-201ENST00000607321 456 ntBASIC6.4□□□□□ -1.38
USP29Q9HBJ7 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.4□□□□□ -1.39
USP29Q9HBJ7 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USP29Q9HBJ7 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
USP29Q9HBJ7 AL121768.1-201ENST00000613917 2544 ntBASIC6.4□□□□□ -1.39
USP29Q9HBJ7 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.4□□□□□ -1.39
USP29Q9HBJ7 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.4□□□□□ -1.39
USP29Q9HBJ7 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
USP29Q9HBJ7 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.4□□□□□ -1.39
USP29Q9HBJ7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
USP29Q9HBJ7 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.4□□□□□ -1.39
USP29Q9HBJ7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 OR7E156P-201ENST00000400303 464 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 RN7SKP121-201ENST00000410842 305 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 GTF3AP1-201ENST00000416942 1004 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 RPL7AP14-201ENST00000424041 802 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 HGF-207ENST00000453018 721 ntTSL 3 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 Z83838.1-202ENST00000456225 839 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AC112184.1-201ENST00000505179 312 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AC093815.1-201ENST00000508637 280 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 KHDC1P1-201ENST00000511053 508 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AC021146.10-201ENST00000515628 706 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AP001858.2-201ENST00000536213 601 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AC040174.2-201ENST00000602701 465 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AC022919.1-201ENST00000624979 626 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 OR7A1P-202ENST00000641542 1158 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 CCNT2P1-201ENST00000423082 1315 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 AC006600.2-201ENST00000624834 2506 ntBASIC6.39□□□□□ -1.39
USP29Q9HBJ7 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.39□□□□□ -1.39
USP29Q9HBJ7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AL359976.1-201ENST00000418655 3528 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 RNA5SP435-201ENST00000364044 108 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC015977.1-201ENST00000418887 292 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AL389925.1-201ENST00000432257 728 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 EMC3-AS1-205ENST00000438698 534 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 SOCS5P1-201ENST00000440415 949 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 HMGN1P2-201ENST00000445197 310 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 OR52Y1P-201ENST00000452418 828 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 RARRES2P3-201ENST00000457739 473 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.38□□□□□ -1.39
USP29Q9HBJ7 AC018635.1-201ENST00000468292 1030 ntBASIC6.38□□□□□ -1.39
USP29Q9HBJ7 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms