Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNA5SP211-201ENST00000365516 117 ntBASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 CHEK2P5-201ENST00000423877 246 ntBASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 RPL12P12-201ENST00000424633 501 ntBASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 RPSAP65-201ENST00000429660 595 ntBASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 LDHAP2-201ENST00000437325 985 ntBASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 MTATP6P1-201ENST00000514057 681 ntBASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 AC007346.1-201ENST00000569208 867 ntBASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 AC068768.2-201ENST00000602352 343 ntBASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 AP001267.4-201ENST00000602598 545 ntBASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 AL357140.4-201ENST00000636827 412 ntBASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UPF3BQ9BZI7 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 AC138907.8-201ENST00000623981 2256 ntBASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 SNORA17A-201ENST00000391185 133 ntBASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 AL353662.1-201ENST00000439099 327 ntBASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 NXT1P1-201ENST00000458481 316 ntBASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 AL603882.1-201ENST00000463059 681 ntBASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 OLR1-210ENST00000544577 924 ntTSL 5 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 AP001437.1-201ENST00000608783 456 ntBASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 SNORA17.5-201ENST00000630429 132 ntBASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC7.07□□□□□ -1.28
UPF3BQ9BZI7 MTCO1P28-201ENST00000574177 1528 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 MIR323A-201ENST00000362199 86 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 RNA5SP510-201ENST00000364697 99 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 RPS7P3-201ENST00000443360 580 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 OR52I1-201ENST00000450052 1050 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AL158068.1-201ENST00000506116 616 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 snoU109.5-201ENST00000516231 132 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AC090424.1-201ENST00000535243 736 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 NANOGNBP2-201ENST00000544753 553 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AC090826.1-203ENST00000569235 490 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AC091167.5-201ENST00000605689 894 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 AL138960.1-201ENST00000613838 513 ntBASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
UPF3BQ9BZI7 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms