Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 PARP4P2-201ENST00000446672 3326 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 OR7E101P-201ENST00000400428 513 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AL512637.1-201ENST00000439523 1231 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 ACA64.1-201ENST00000459171 127 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AL603882.1-201ENST00000463059 681 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 RN7SL57P-201ENST00000493687 290 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 TRIM51DP-201ENST00000529746 596 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AC100767.2-201ENST00000604840 693 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AC015982.1-201ENST00000608113 465 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AP000550.3-201ENST00000637734 379 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 AC090220.1-201ENST00000593078 1699 ntBASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
ECHDC3Q96DC8 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 MTND5P12-201ENST00000502851 1449 ntBASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 AC068769.1-201ENST00000474767 2426 ntBASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 ZNF402P-201ENST00000404435 3100 ntBASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 AL157777.1-201ENST00000468100 304 ntBASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 PFN1P6-201ENST00000476786 399 ntBASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 AC090568.1-201ENST00000509499 856 ntBASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 GAPDHP71-201ENST00000511530 1003 ntBASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 RN7SKP288-201ENST00000516227 268 ntBASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 HMGN2P36-201ENST00000529541 409 ntBASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 ZNF322P1-201ENST00000568013 1209 ntBASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 AC092121.1-201ENST00000569452 202 ntBASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 GARSP1-201ENST00000570895 719 ntBASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ECHDC3Q96DC8 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 AC005725.1-201ENST00000577346 2607 ntBASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 OR52B3P-201ENST00000314715 928 ntBASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.91□□□□□ -1.46
ECHDC3Q96DC8 RPS29P14-201ENST00000431518 171 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms