Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC100814.1-201ENST00000606963 623 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AL591167.1-201ENST00000607321 456 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC022106.1-201ENST00000612834 766 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AF117829.2-201ENST00000619538 361 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC027506.1-201ENST00000621395 198 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 AC015660.5-201ENST00000623238 564 ntBASIC5.85□□□□□ -1.47
VPS33AQ96AX1 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
VPS33AQ96AX1 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AP000473.2-201ENST00000602659 1537 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AP005435.3-201ENST00000531260 3198 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AL356317.1-201ENST00000396110 1436 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC239868.2-201ENST00000564237 4527 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 MIR133A2-201ENST00000347538 102 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 RNA5SP375-201ENST00000362975 119 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 RNU6-618P-201ENST00000363518 112 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 MIR7-1-201ENST00000384871 110 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 MIR137-201ENST00000385223 102 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC003045.1-201ENST00000398779 713 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 DHFRP2-201ENST00000414224 547 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AL354868.1-201ENST00000417077 482 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC002127.1-201ENST00000421305 225 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC007064.3-201ENST00000422608 359 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC106901.1-201ENST00000425086 698 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AL645939.3-201ENST00000435408 225 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 ARAFP2-201ENST00000440565 559 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 RN7SL552P-201ENST00000462094 276 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 RN7SL83P-201ENST00000468131 297 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC124945.1-201ENST00000485133 188 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 GM2AP2-201ENST00000491764 562 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 Y_RNA.710-201ENST00000516975 110 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC244502.2-201ENST00000543361 851 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 CHEK2P2-201ENST00000554701 672 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 RN7SL261P-201ENST00000613441 282 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 RNA5SP439-201ENST00000617595 124 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AC000095.2-202ENST00000637415 154 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 HSPD1P7-201ENST00000447985 1686 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
VPS33AQ96AX1 AL161756.3-201ENST00000641216 2071 ntBASIC5.84□□□□□ -1.47
VPS33AQ96AX1 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.84□□□□□ -1.48
VPS33AQ96AX1 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.84□□□□□ -1.48
VPS33AQ96AX1 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.84□□□□□ -1.48
VPS33AQ96AX1 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
VPS33AQ96AX1 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
VPS33AQ96AX1 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.83□□□□□ -1.48
VPS33AQ96AX1 LINC02019-201ENST00000608605 2060 ntBASIC5.83□□□□□ -1.48
VPS33AQ96AX1 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms