Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 RPS4XP12-201ENST00000461747 709 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 KHDC1P1-201ENST00000511053 508 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 IGKV1D-32-201ENST00000517449 318 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 OR56A7P-201ENST00000524865 941 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 OR4A17P-201ENST00000526032 904 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 MRPL45P2-203ENST00000573318 473 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AC006120.1-201ENST00000579375 546 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 RPL29P33-201ENST00000587474 316 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AL031429.2-201ENST00000602605 649 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AC099777.1-201ENST00000603779 1070 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 NANOGP3-201ENST00000605855 286 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AL451049.1-201ENST00000608672 497 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AL137000.1-201ENST00000610528 1244 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AC010632.3-201ENST00000611377 369 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AL445670.1-201ENST00000618889 801 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 MIR6829-201ENST00000620375 67 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AL138693.1-201ENST00000622219 129 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 FBXL21-201ENST00000297158 1305 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 RBMY1HP-201ENST00000382759 1389 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 OFD1P15Y-201ENST00000411536 1392 ntBASIC4.36□□□□□ -1.71
NUP35Q8NFH5 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
NUP35Q8NFH5 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC104964.3-201ENST00000606115 2860 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC092681.1-201ENST00000297369 291 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 RNA5SP346-201ENST00000363541 121 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 NPL-202ENST00000367552 745 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 EEF1GP6-201ENST00000402309 905 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 MICG-208ENST00000416822 132 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC113412.1-201ENST00000425840 504 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 RPSAP65-201ENST00000429660 595 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC112492.2-201ENST00000432774 1030 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 RPL3P11-201ENST00000434028 1146 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AL929410.2-201ENST00000451170 189 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC104164.1-201ENST00000460282 590 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 SEPT10P1-201ENST00000517342 1162 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 OR4A42P-201ENST00000531397 938 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC063977.7-201ENST00000594454 337 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.35□□□□□ -1.71
NUP35Q8NFH5 RPS4XP21-201ENST00000603814 750 ntBASIC4.35□□□□□ -1.71
NUP35Q8NFH5 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 217.8 ms