Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 GNG2-208ENST00000554875 430 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC015818.6-201ENST00000584274 634 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 PRELID3BP3-201ENST00000584963 545 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC025171.4-201ENST00000607250 1047 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC026951.2-201ENST00000613847 241 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AL606490.8-201ENST00000441624 319 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 MIR3691-201ENST00000578066 90 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 MIR6820-201ENST00000611508 62 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC105105.5-201ENST00000622635 1294 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 RAPGEF5-201ENST00000344041 6621 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AL391422.1-201ENST00000402155 436 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 IARS-213ENST00000627121 4587 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC062022.1-201ENST00000451026 1684 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 OR2M1P-201ENST00000318104 951 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AL049697.3-201ENST00000406493 982 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 PTCD2P2-201ENST00000415579 1095 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AL713922.1-201ENST00000416477 747 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 CASC6-201ENST00000437768 733 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC092967.1-201ENST00000449016 481 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 LRRC37A14P-201ENST00000452297 462 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 RN7SL208P-201ENST00000577964 296 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AF287957.1-201ENST00000607368 1595 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC211433.2-201ENST00000608433 387 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC130448.2-201ENST00000624082 374 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC010329.1-201ENST00000593903 8328 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 U8.4-201ENST00000363626 134 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 SPRYD7P1-201ENST00000443861 570 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 ASB8-202ENST00000535055 657 ntTSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 TXNP4-201ENST00000575018 310 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC111186.1-201ENST00000604684 130 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 AC007998.4-201ENST00000612496 2533 ntBASIC1.83□□□□□ -2.12
SYNE1Q8NF91 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 FGG-205ENST00000407946 1636 ntTSL 5 BASIC1.83□□□□□ -2.12
SYNE1Q8NF91 HMGN1P20-201ENST00000411849 300 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC002553.3-201ENST00000453002 341 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 BX284632.1-201ENST00000478218 541 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC092824.1-201ENST00000483524 576 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 HIGD1AP5-201ENST00000529959 259 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 MRPS21P9-201ENST00000571150 257 ntBASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC1.82□□□□□ -2.12
SYNE1Q8NF91 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms