Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 NRBF2P4-201ENST00000520874 850 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 AC012414.7-202ENST00000622705 1090 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 AC005332.9-201ENST00000620266 2921 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 AC002090.1-201ENST00000625000 2138 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 AP002370.1-201ENST00000528055 1602 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 CR1-204ENST00000367052 7469 ntTSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 CR1-205ENST00000367053 7469 ntTSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 CYP4F32P-201ENST00000426492 504 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 RPS7P3-201ENST00000443360 580 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
LRRK2Q5S007 OR7A15P-201ENST00000449848 1009 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 RPS18P6-201ENST00000476880 458 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 RN7SL561P-201ENST00000488553 281 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 SNRPCP2-201ENST00000504370 475 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 AC141002.1-201ENST00000607025 279 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 AC016717.3-201ENST00000624730 554 ntBASIC5.11□□□□□ -1.59
LRRK2Q5S007 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.11□□□□□ -1.59
LRRK2Q5S007 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 TTLL5-207ENST00000554510 2624 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 FBXO40-201ENST00000338040 5929 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 AL589647.1-201ENST00000402485 466 ntBASIC5.1□□□□□ -1.59
LRRK2Q5S007 MRPL53P1-201ENST00000414323 319 ntBASIC5.1□□□□□ -1.59
LRRK2Q5S007 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 COX6CP17-201ENST00000421389 185 ntBASIC5.1□□□□□ -1.59
LRRK2Q5S007 AC026979.1-201ENST00000492525 396 ntBASIC5.1□□□□□ -1.59
LRRK2Q5S007 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 AC093824.1-201ENST00000508796 343 ntBASIC5.1□□□□□ -1.59
LRRK2Q5S007 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.1□□□□□ -1.59
LRRK2Q5S007 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 AC018558.5-201ENST00000565840 952 ntBASIC5.1□□□□□ -1.59
LRRK2Q5S007 AC138811.1-201ENST00000569096 361 ntTSL 3 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 AL450226.2-201ENST00000622913 439 ntBASIC5.1□□□□□ -1.59
LRRK2Q5S007 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
LRRK2Q5S007 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
LRRK2Q5S007 AL357153.1-201ENST00000500016 2941 ntTSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms