Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 AC006539.1-201ENST00000481419 501 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 PPIAP19-201ENST00000486414 492 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 RPL19P11-201ENST00000495944 589 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 RNA5SP400-201ENST00000517155 111 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 OR4A40P-201ENST00000533878 948 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 TXNP4-201ENST00000575018 310 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 GLYATL1P2-202ENST00000588046 902 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 AC245052.7-201ENST00000601161 359 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 AL021368.3-201ENST00000607119 578 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 AC103703.1-201ENST00000634783 663 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 PROS2P-201ENST00000474651 1951 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 MTND5P12-201ENST00000502851 1449 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 MSL3P1-202ENST00000440028 1468 ntBASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CHRFAM7AQ494W8 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 SAGE3P-201ENST00000619800 1635 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 RPL5P20-201ENST00000403848 896 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AL121835.1-201ENST00000404250 354 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 MTND2P12-201ENST00000417560 1252 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC021876.1-201ENST00000425959 359 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 IGLV3-4-201ENST00000432300 244 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 CLUHP1-201ENST00000435012 1190 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 PNKDP1-201ENST00000435914 430 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AL390879.1-201ENST00000439143 386 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 UBE2V2P4-201ENST00000447495 259 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC108751.3-201ENST00000461814 1020 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 RN7SL177P-201ENST00000476596 299 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 SNX18P24-201ENST00000505249 671 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC116158.1-201ENST00000560231 2129 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 AC073869.7-201ENST00000640874 297 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 XKRY2-202ENST00000623874 1581 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 XKRY-202ENST00000624960 1581 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.37□□□□□ -1.55
CHRFAM7AQ494W8 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHRFAM7AQ494W8 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRFAM7AQ494W8 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHRFAM7AQ494W8 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
CHRFAM7AQ494W8 AC140134.1-201ENST00000511830 3544 ntBASIC5.36□□□□□ -1.55
CHRFAM7AQ494W8 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CHRFAM7AQ494W8 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.36□□□□□ -1.55
CHRFAM7AQ494W8 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.36□□□□□ -1.55
CHRFAM7AQ494W8 AC239868.2-201ENST00000564237 4527 ntBASIC5.36□□□□□ -1.55
CHRFAM7AQ494W8 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHRFAM7AQ494W8 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHRFAM7AQ494W8 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CHRFAM7AQ494W8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms