Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 OR8G3P-201ENST00000533406 921 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 BLZF2P-201ENST00000553776 1130 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC7.38□□□□□ -1.23
SOX4Q06945 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX4Q06945 AC087481.2-201ENST00000565492 330 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC7.38□□□□□ -1.23
SOX4Q06945 RN7SL66P-201ENST00000582099 264 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC7.38□□□□□ -1.23
SOX4Q06945 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC7.38□□□□□ -1.23
SOX4Q06945 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX4Q06945 AC073544.2-201ENST00000601155 540 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 AC004908.1-201ENST00000606572 541 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 AC108747.1-201ENST00000609508 535 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 AC024941.1-201ENST00000612250 334 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 AC015819.1-201ENST00000613588 663 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
SOX4Q06945 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SOX4Q06945 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SOX4Q06945 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SOX4Q06945 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SOX4Q06945 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SOX4Q06945 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX4Q06945 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.38□□□□□ -1.23
SOX4Q06945 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SOX4Q06945 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.38□□□□□ -1.23
SOX4Q06945 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC7.38□□□□□ -1.23
SOX4Q06945 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
SOX4Q06945 AL136981.1-203ENST00000451452 3844 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.38□□□□□ -1.23
SOX4Q06945 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SOX4Q06945 CR381670.1-201ENST00000624291 1693 ntBASIC7.38□□□□□ -1.23
SOX4Q06945 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SOX4Q06945 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.37□□□□□ -1.23
SOX4Q06945 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.37□□□□□ -1.23
SOX4Q06945 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.37□□□□□ -1.23
SOX4Q06945 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 CYP4Z2P-202ENST00000505841 1436 ntTSL 2 BASIC7.37□□□□□ -1.23
SOX4Q06945 SMG1-202ENST00000446231 16115 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 ZNF90P1-201ENST00000480493 1951 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
SOX4Q06945 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 AC007938.1-201ENST00000562524 2902 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 MTND5P11-201ENST00000511037 1812 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 RNA5SP308-201ENST00000362532 115 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 RNU6-252P-201ENST00000363232 107 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 PPIAP26-201ENST00000377951 522 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 Y_RNA.516-201ENST00000384541 124 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 Y_RNA.553-201ENST00000384670 102 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.37□□□□□ -1.23
SOX4Q06945 RN7SKP273-201ENST00000411392 314 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC7.37□□□□□ -1.23
SOX4Q06945 AL356121.1-201ENST00000442911 156 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.37□□□□□ -1.23
SOX4Q06945 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC7.37□□□□□ -1.23
SOX4Q06945 AC027673.1-201ENST00000456245 405 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.37□□□□□ -1.23
SOX4Q06945 AP003385.3-201ENST00000472498 287 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 RPS14P8-201ENST00000478778 369 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 RN7SL502P-201ENST00000481857 290 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 AC112225.1-201ENST00000508230 297 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC7.37□□□□□ -1.23
SOX4Q06945 AC104417.1-201ENST00000523974 751 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 AC092851.1-201ENST00000535964 478 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 AC007068.2-201ENST00000543168 395 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 AC244502.2-201ENST00000543361 851 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.37□□□□□ -1.23
SOX4Q06945 AC021483.2-201ENST00000567415 758 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC7.37□□□□□ -1.23
SOX4Q06945 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC7.37□□□□□ -1.23
SOX4Q06945 CTSLP2-201ENST00000580501 394 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC7.37□□□□□ -1.23
SOX4Q06945 MIR3611-201ENST00000584484 83 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC7.37□□□□□ -1.23
SOX4Q06945 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.37□□□□□ -1.23
SOX4Q06945 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 AL590032.1-201ENST00000604920 252 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 Six3os1_1.1-201ENST00000620900 87 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 PDCD6IPP1-202ENST00000622242 1064 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 AF246928.1-201ENST00000623768 87 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 AL356596.1-201ENST00000624230 379 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.37□□□□□ -1.23
SOX4Q06945 FP325313.1-201ENST00000638228 703 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 AC020978.6-201ENST00000571197 3177 ntBASIC7.37□□□□□ -1.23
SOX4Q06945 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
SOX4Q06945 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.37□□□□□ -1.23
SOX4Q06945 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
SOX4Q06945 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC7.37□□□□□ -1.23
SOX4Q06945 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms