Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.34□□□□□ -1.55
CDC42P60953 SNORA70.6-201ENST00000383934 134 ntBASIC5.34□□□□□ -1.55
CDC42P60953 RNA5SP91-201ENST00000390902 119 ntBASIC5.34□□□□□ -1.55
CDC42P60953 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.34□□□□□ -1.55
CDC42P60953 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.34□□□□□ -1.55
CDC42P60953 RPL35AP31-201ENST00000418340 337 ntBASIC5.34□□□□□ -1.55
CDC42P60953 AC006509.1-201ENST00000420788 634 ntBASIC5.34□□□□□ -1.55
CDC42P60953 OR10T1P-201ENST00000424327 947 ntBASIC5.34□□□□□ -1.55
CDC42P60953 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDC42P60953 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.34□□□□□ -1.55
CDC42P60953 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.34□□□□□ -1.55
CDC42P60953 AL645936.1-201ENST00000441979 518 ntBASIC5.34□□□□□ -1.55
CDC42P60953 ZNF619P1-201ENST00000446539 752 ntBASIC5.34□□□□□ -1.55
CDC42P60953 MEMO1P4-201ENST00000453590 386 ntBASIC5.34□□□□□ -1.55
CDC42P60953 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.34□□□□□ -1.55
CDC42P60953 RN7SL39P-201ENST00000462264 297 ntBASIC5.34□□□□□ -1.55
CDC42P60953 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.34□□□□□ -1.55
CDC42P60953 AC122714.1-201ENST00000502510 459 ntBASIC5.34□□□□□ -1.55
CDC42P60953 ASNSP4-201ENST00000511103 447 ntBASIC5.34□□□□□ -1.55
CDC42P60953 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.34□□□□□ -1.55
CDC42P60953 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.34□□□□□ -1.55
CDC42P60953 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.34□□□□□ -1.55
CDC42P60953 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.34□□□□□ -1.55
CDC42P60953 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.34□□□□□ -1.55
CDC42P60953 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.34□□□□□ -1.55
CDC42P60953 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.34□□□□□ -1.55
CDC42P60953 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.34□□□□□ -1.55
CDC42P60953 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.34□□□□□ -1.55
CDC42P60953 AL645933.2-201ENST00000606743 1207 ntBASIC5.34□□□□□ -1.55
CDC42P60953 MIR6133-201ENST00000617057 108 ntBASIC5.34□□□□□ -1.55
CDC42P60953 MIR6503-201ENST00000622884 86 ntBASIC5.34□□□□□ -1.55
CDC42P60953 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.34□□□□□ -1.55
CDC42P60953 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CDC42P60953 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.34□□□□□ -1.55
CDC42P60953 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDC42P60953 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDC42P60953 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDC42P60953 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDC42P60953 AC119674.1-202ENST00000641333 1860 ntBASIC5.34□□□□□ -1.55
CDC42P60953 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CDC42P60953 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDC42P60953 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDC42P60953 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.33□□□□□ -1.56
CDC42P60953 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
CDC42P60953 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 ABCC13-202ENST00000463099 3842 ntBASIC5.33□□□□□ -1.56
CDC42P60953 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.33□□□□□ -1.56
CDC42P60953 AP001029.2-203ENST00000589795 4910 ntBASIC5.33□□□□□ -1.56
CDC42P60953 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CDC42P60953 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CDC42P60953 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 RN7SKP78-201ENST00000364711 318 ntBASIC5.33□□□□□ -1.56
CDC42P60953 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CDC42P60953 RNU1-136P-201ENST00000384181 164 ntBASIC5.33□□□□□ -1.56
CDC42P60953 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDC42P60953 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.33□□□□□ -1.56
CDC42P60953 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.33□□□□□ -1.56
CDC42P60953 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.33□□□□□ -1.56
CDC42P60953 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.33□□□□□ -1.56
CDC42P60953 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 BX119904.3-201ENST00000428194 957 ntBASIC5.33□□□□□ -1.56
CDC42P60953 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.33□□□□□ -1.56
CDC42P60953 RPS23P9-201ENST00000448848 438 ntBASIC5.33□□□□□ -1.56
CDC42P60953 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC5.33□□□□□ -1.56
CDC42P60953 RN7SL393P-201ENST00000463588 296 ntBASIC5.33□□□□□ -1.56
CDC42P60953 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.33□□□□□ -1.56
CDC42P60953 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.33□□□□□ -1.56
CDC42P60953 AC124891.1-201ENST00000536322 519 ntBASIC5.33□□□□□ -1.56
CDC42P60953 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.33□□□□□ -1.56
CDC42P60953 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.33□□□□□ -1.56
CDC42P60953 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.33□□□□□ -1.56
CDC42P60953 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.33□□□□□ -1.56
CDC42P60953 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CDC42P60953 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.33□□□□□ -1.56
CDC42P60953 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.33□□□□□ -1.56
CDC42P60953 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDC42P60953 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CDC42P60953 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CDC42P60953 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.33□□□□□ -1.56
CDC42P60953 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42P60953 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
CDC42P60953 AL360270.2-201ENST00000562952 5985 ntBASIC5.32□□□□□ -1.56
CDC42P60953 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CDC42P60953 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42P60953 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.32□□□□□ -1.56
CDC42P60953 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42P60953 AC015689.2-201ENST00000528172 1738 ntBASIC5.32□□□□□ -1.56
CDC42P60953 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms