Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
CLRN1P58418 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.96□□□□□ -1.46
CLRN1P58418 SALL4P7-201ENST00000555779 3120 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.96□□□□□ -1.46
CLRN1P58418 DOCK11P1-201ENST00000553480 5932 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 AL512353.3-201ENST00000417517 1326 ntBASIC5.96□□□□□ -1.46
CLRN1P58418 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
CLRN1P58418 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
CLRN1P58418 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC5.95□□□□□ -1.46
CLRN1P58418 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.95□□□□□ -1.46
CLRN1P58418 AC017079.1-201ENST00000333650 415 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 UBBP1-201ENST00000392399 473 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AL021331.1-201ENST00000402817 582 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 HNRNPDP2-201ENST00000406475 478 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.95□□□□□ -1.46
CLRN1P58418 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 NENFP1-201ENST00000419476 466 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.95□□□□□ -1.46
CLRN1P58418 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.95□□□□□ -1.46
CLRN1P58418 RPL3P11-201ENST00000434028 1146 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AC073052.1-201ENST00000440417 714 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 AL356133.1-201ENST00000444762 372 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 AL049634.1-201ENST00000453770 1720 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC5.95□□□□□ -1.46
CLRN1P58418 CTSLP6-201ENST00000458273 1002 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC5.95□□□□□ -1.46
CLRN1P58418 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC5.95□□□□□ -1.46
CLRN1P58418 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.95□□□□□ -1.46
CLRN1P58418 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.95□□□□□ -1.46
CLRN1P58418 IGLV3-6-201ENST00000523937 250 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.95□□□□□ -1.46
CLRN1P58418 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 EEF1A1P17-201ENST00000547505 1275 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 DUXAP6-201ENST00000553858 601 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.95□□□□□ -1.46
CLRN1P58418 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.95□□□□□ -1.46
CLRN1P58418 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.95□□□□□ -1.46
CLRN1P58418 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.95□□□□□ -1.46
CLRN1P58418 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 AC010287.1-201ENST00000566916 357 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AC007346.1-201ENST00000569208 867 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 PPIAP14-201ENST00000577627 496 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.95□□□□□ -1.46
CLRN1P58418 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.95□□□□□ -1.46
CLRN1P58418 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 AC010503.3-201ENST00000594355 540 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 AC010620.1-201ENST00000601088 1102 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 SUMO2P14-201ENST00000604488 293 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AC108865.2-201ENST00000606881 432 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.95□□□□□ -1.46
CLRN1P58418 AC092106.3-201ENST00000611308 722 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AL359513.1-201ENST00000614364 557 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AC009090.3-201ENST00000616553 565 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AC096708.4-201ENST00000620563 552 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 AC009120.2-204ENST00000621548 2032 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AC006328.2-201ENST00000623198 397 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 AC012005.2-201ENST00000624333 397 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
CLRN1P58418 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 AC006453.3-201ENST00000635891 377 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC5.95□□□□□ -1.46
CLRN1P58418 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.95□□□□□ -1.46
CLRN1P58418 NPL-212ENST00000614468 2376 ntTSL 5 BASIC5.95□□□□□ -1.46
CLRN1P58418 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CLRN1P58418 OR52B5P-204ENST00000641744 3467 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 UGT2B27P-201ENST00000505092 1620 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 DLG2-230ENST00000532653 2891 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
CLRN1P58418 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
CLRN1P58418 AC092451.3-201ENST00000625067 1343 ntBASIC5.95□□□□□ -1.46
CLRN1P58418 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms