Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.75□□□□□ -1.49
PKNOX1P55347 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.75□□□□□ -1.49
PKNOX1P55347 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.75□□□□□ -1.49
PKNOX1P55347 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.75□□□□□ -1.49
PKNOX1P55347 AC108103.1-201ENST00000511286 446 ntBASIC5.75□□□□□ -1.49
PKNOX1P55347 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.75□□□□□ -1.49
PKNOX1P55347 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.75□□□□□ -1.49
PKNOX1P55347 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
PKNOX1P55347 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.75□□□□□ -1.49
PKNOX1P55347 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.75□□□□□ -1.49
PKNOX1P55347 AL135999.3-201ENST00000610501 812 ntBASIC5.75□□□□□ -1.49
PKNOX1P55347 MIR6774-201ENST00000614651 70 ntBASIC5.75□□□□□ -1.49
PKNOX1P55347 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.75□□□□□ -1.49
PKNOX1P55347 AL512652.1-201ENST00000619006 500 ntBASIC5.75□□□□□ -1.49
PKNOX1P55347 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
PKNOX1P55347 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PKNOX1P55347 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.75□□□□□ -1.49
PKNOX1P55347 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PKNOX1P55347 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.75□□□□□ -1.49
PKNOX1P55347 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PKNOX1P55347 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PKNOX1P55347 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PKNOX1P55347 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PKNOX1P55347 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PKNOX1P55347 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PKNOX1P55347 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
PKNOX1P55347 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PKNOX1P55347 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PKNOX1P55347 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.74□□□□□ -1.49
PKNOX1P55347 BCORP1-203ENST00000513194 5093 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
PKNOX1P55347 RNA5SP110-201ENST00000362638 115 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
PKNOX1P55347 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PKNOX1P55347 NPM1P38-201ENST00000403835 865 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.74□□□□□ -1.49
PKNOX1P55347 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.74□□□□□ -1.49
PKNOX1P55347 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.74□□□□□ -1.49
PKNOX1P55347 RN7SKP279-201ENST00000411383 298 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.74□□□□□ -1.49
PKNOX1P55347 MRPS21P2-201ENST00000424704 264 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 AC092865.3-201ENST00000425390 1026 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 AL356121.1-201ENST00000442911 156 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 AC073072.2-201ENST00000447425 348 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.74□□□□□ -1.49
PKNOX1P55347 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.74□□□□□ -1.49
PKNOX1P55347 AC023245.1-201ENST00000468501 517 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.74□□□□□ -1.49
PKNOX1P55347 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.74□□□□□ -1.49
PKNOX1P55347 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC5.74□□□□□ -1.49
PKNOX1P55347 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.74□□□□□ -1.49
PKNOX1P55347 MIR2117-201ENST00000516780 80 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 OR8Q1P-201ENST00000526467 655 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.74□□□□□ -1.49
PKNOX1P55347 AC126615.2-201ENST00000553003 515 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.74□□□□□ -1.49
PKNOX1P55347 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.74□□□□□ -1.49
PKNOX1P55347 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.74□□□□□ -1.49
PKNOX1P55347 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.74□□□□□ -1.49
PKNOX1P55347 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.74□□□□□ -1.49
PKNOX1P55347 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.74□□□□□ -1.49
PKNOX1P55347 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.74□□□□□ -1.49
PKNOX1P55347 AL513327.3-201ENST00000602618 469 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.74□□□□□ -1.49
PKNOX1P55347 AC005899.6-201ENST00000620729 297 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 AL138693.1-201ENST00000622219 129 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 AC007603.3-201ENST00000636915 979 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PKNOX1P55347 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PKNOX1P55347 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PKNOX1P55347 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PKNOX1P55347 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PKNOX1P55347 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PKNOX1P55347 CAP1P2-201ENST00000417455 1409 ntBASIC5.74□□□□□ -1.49
PKNOX1P55347 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
PKNOX1P55347 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
PKNOX1P55347 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.73□□□□□ -1.49
PKNOX1P55347 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
PKNOX1P55347 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PKNOX1P55347 SNRPEP6-201ENST00000407465 277 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.73□□□□□ -1.49
PKNOX1P55347 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.73□□□□□ -1.49
PKNOX1P55347 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.73□□□□□ -1.49
PKNOX1P55347 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.73□□□□□ -1.49
PKNOX1P55347 SUMO2P8-201ENST00000434672 286 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.73□□□□□ -1.49
PKNOX1P55347 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PKNOX1P55347 AL445928.1-201ENST00000435545 222 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 MTND2P40-201ENST00000436718 841 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.73□□□□□ -1.49
PKNOX1P55347 AC010240.2-201ENST00000445363 1205 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 AC007383.1-201ENST00000445875 636 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.73□□□□□ -1.49
PKNOX1P55347 AC092865.4-201ENST00000477936 615 ntBASIC5.73□□□□□ -1.49
PKNOX1P55347 AC012123.2-201ENST00000485809 248 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms