Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH12P55289 AC107977.1-201ENST00000355745 939 ntBASIC5.68□□□□□ -1.5
CDH12P55289 RNA5SP514-201ENST00000363717 111 ntBASIC5.68□□□□□ -1.5
CDH12P55289 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.68□□□□□ -1.5
CDH12P55289 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH12P55289 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH12P55289 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH12P55289 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH12P55289 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH12P55289 RPS3AP38-201ENST00000435889 763 ntBASIC5.68□□□□□ -1.5
CDH12P55289 PSMD8P1-201ENST00000436275 769 ntBASIC5.68□□□□□ -1.5
CDH12P55289 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH12P55289 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH12P55289 AL031681.1-201ENST00000443304 400 ntBASIC5.68□□□□□ -1.5
CDH12P55289 TXNP2-201ENST00000443918 295 ntBASIC5.68□□□□□ -1.5
CDH12P55289 PPIAP32-201ENST00000449940 472 ntBASIC5.68□□□□□ -1.5
CDH12P55289 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH12P55289 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH12P55289 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.68□□□□□ -1.5
CDH12P55289 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH12P55289 RN7SL352P-201ENST00000466002 277 ntBASIC5.68□□□□□ -1.5
CDH12P55289 AC018635.1-201ENST00000468292 1030 ntBASIC5.68□□□□□ -1.5
CDH12P55289 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH12P55289 RN7SL326P-201ENST00000477493 296 ntBASIC5.68□□□□□ -1.5
CDH12P55289 RN7SL502P-201ENST00000481857 290 ntBASIC5.68□□□□□ -1.5
CDH12P55289 AC124945.1-201ENST00000485133 188 ntBASIC5.68□□□□□ -1.5
CDH12P55289 AC018639.1-201ENST00000492994 442 ntBASIC5.68□□□□□ -1.5
CDH12P55289 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 AC090058.1-201ENST00000498788 435 ntBASIC5.68□□□□□ -1.5
CDH12P55289 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH12P55289 AC010374.2-201ENST00000512933 535 ntBASIC5.68□□□□□ -1.5
CDH12P55289 AC027338.1-201ENST00000514840 825 ntBASIC5.68□□□□□ -1.5
CDH12P55289 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH12P55289 AC093816.1-201ENST00000515076 913 ntBASIC5.68□□□□□ -1.5
CDH12P55289 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH12P55289 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.68□□□□□ -1.5
CDH12P55289 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH12P55289 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 AC135983.3-201ENST00000528049 1226 ntBASIC5.68□□□□□ -1.5
CDH12P55289 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH12P55289 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH12P55289 NPM1P42-201ENST00000560329 862 ntBASIC5.68□□□□□ -1.5
CDH12P55289 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH12P55289 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH12P55289 AC027281.1-201ENST00000574178 758 ntBASIC5.68□□□□□ -1.5
CDH12P55289 RNU4ATAC-201ENST00000580972 127 ntBASIC5.68□□□□□ -1.5
CDH12P55289 SNORA74.4-201ENST00000607595 199 ntBASIC5.68□□□□□ -1.5
CDH12P55289 AL355802.4-201ENST00000607635 548 ntBASIC5.68□□□□□ -1.5
CDH12P55289 AL391834.1-201ENST00000609609 560 ntBASIC5.68□□□□□ -1.5
CDH12P55289 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.68□□□□□ -1.5
CDH12P55289 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH12P55289 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.68□□□□□ -1.5
CDH12P55289 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH12P55289 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH12P55289 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH12P55289 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.68□□□□□ -1.5
CDH12P55289 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CDH12P55289 AL929601.4-201ENST00000613011 1341 ntBASIC5.68□□□□□ -1.5
CDH12P55289 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CDH12P55289 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CDH12P55289 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 AC239868.2-201ENST00000564237 4527 ntBASIC5.67□□□□□ -1.5
CDH12P55289 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CDH12P55289 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH12P55289 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CDH12P55289 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 AC217777.1-201ENST00000570034 1471 ntBASIC5.67□□□□□ -1.5
CDH12P55289 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDH12P55289 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH12P55289 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
CDH12P55289 RNA5SP485-201ENST00000365053 119 ntBASIC5.67□□□□□ -1.5
CDH12P55289 AL353625.1-202ENST00000366273 571 ntBASIC5.67□□□□□ -1.5
CDH12P55289 PTGES3P2-201ENST00000407942 482 ntBASIC5.67□□□□□ -1.5
CDH12P55289 RN7SKP121-201ENST00000410842 305 ntBASIC5.67□□□□□ -1.5
CDH12P55289 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH12P55289 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH12P55289 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH12P55289 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH12P55289 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH12P55289 USP24P1-201ENST00000433802 779 ntBASIC5.67□□□□□ -1.5
CDH12P55289 GAPDHP23-201ENST00000444823 993 ntBASIC5.67□□□□□ -1.5
CDH12P55289 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH12P55289 MTND6P32-201ENST00000457611 483 ntBASIC5.67□□□□□ -1.5
CDH12P55289 RN7SL39P-201ENST00000462264 297 ntBASIC5.67□□□□□ -1.5
CDH12P55289 RPL12P31-201ENST00000478433 450 ntBASIC5.67□□□□□ -1.5
CDH12P55289 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH12P55289 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH12P55289 IGKV2-19-201ENST00000518132 283 ntBASIC5.67□□□□□ -1.5
CDH12P55289 AC009879.1-201ENST00000520029 839 ntBASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms