Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 AC093278.2-201ENST00000564956 2485 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
EPHB3P54753 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC6.94□□□□□ -1.3
EPHB3P54753 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 TRIM49-201ENST00000329758 2163 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 TRIM49C-201ENST00000448984 2163 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
EPHB3P54753 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 RN7SKP237-201ENST00000364663 301 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 RNA5SP77-201ENST00000365394 120 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 RNU6-40P-201ENST00000384254 107 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 RN7SKP97-201ENST00000410966 333 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.94□□□□□ -1.3
EPHB3P54753 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.94□□□□□ -1.3
EPHB3P54753 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 MTND4P18-201ENST00000447010 465 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.94□□□□□ -1.3
EPHB3P54753 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC6.94□□□□□ -1.3
EPHB3P54753 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC6.94□□□□□ -1.3
EPHB3P54753 OFD1P7Y-201ENST00000454643 1155 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 CCNJP2-201ENST00000457810 1163 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 PGBD4P1-201ENST00000473644 407 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 AC112484.3-201ENST00000505910 329 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.94□□□□□ -1.3
EPHB3P54753 AC008429.2-201ENST00000523057 864 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.94□□□□□ -1.3
EPHB3P54753 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC6.94□□□□□ -1.3
EPHB3P54753 AL162632.2-201ENST00000553933 399 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
EPHB3P54753 RN7SL208P-201ENST00000577964 296 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AC005244.1-201ENST00000582566 339 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
EPHB3P54753 AC004805.3-201ENST00000603178 310 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 RBM11P1-201ENST00000604951 799 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AP001596.2-201ENST00000608410 312 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AC104073.3-201ENST00000610942 955 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AC005277.2-201ENST00000617898 390 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 AC093875.1-201ENST00000623688 504 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AC034229.6-201ENST00000623704 224 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AC073592.6-201ENST00000624271 415 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AC019226.1-201ENST00000625666 515 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AC073488.9-201ENST00000631601 754 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.94□□□□□ -1.3
EPHB3P54753 AC084035.1-201ENST00000634543 607 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.94□□□□□ -1.3
EPHB3P54753 AC010329.1-201ENST00000593903 8328 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 AP003119.3-201ENST00000566747 4192 ntBASIC6.94□□□□□ -1.3
EPHB3P54753 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.94□□□□□ -1.3
EPHB3P54753 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 MAK-202ENST00000354489 3941 ntTSL 5 BASIC6.94□□□□□ -1.3
EPHB3P54753 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
EPHB3P54753 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
EPHB3P54753 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.93□□□□□ -1.3
EPHB3P54753 AC099786.3-201ENST00000565735 1410 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.93□□□□□ -1.3
EPHB3P54753 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.93□□□□□ -1.3
EPHB3P54753 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
EPHB3P54753 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
EPHB3P54753 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
EPHB3P54753 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.93□□□□□ -1.3
EPHB3P54753 SNORD115-48-201ENST00000364764 76 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.93□□□□□ -1.3
EPHB3P54753 GSTA8P-201ENST00000404253 637 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC6.93□□□□□ -1.3
EPHB3P54753 UBE2V1P11-201ENST00000411559 285 ntBASIC6.93□□□□□ -1.3
EPHB3P54753 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms