Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-1P43699 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX2-1P43699 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
NKX2-1P43699 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX2-1P43699 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NKX2-1P43699 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
NKX2-1P43699 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 PPIAP23-201ENST00000420099 497 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 AL390879.2-203ENST00000426943 1121 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 AL596268.1-201ENST00000427910 1048 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 RPL5P2-201ENST00000429598 854 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX2-1P43699 AL158214.1-201ENST00000444423 404 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 AL157884.3-201ENST00000448273 1184 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 AC003035.2-201ENST00000448948 696 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX2-1P43699 AL162739.1-201ENST00000450606 307 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX2-1P43699 Z83838.1-202ENST00000456225 839 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX2-1P43699 PPP1R11P1-201ENST00000486095 376 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 RN7SL714P-201ENST00000487050 298 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX2-1P43699 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX2-1P43699 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 snoU109.5-201ENST00000516231 132 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX2-1P43699 RBMS2P1-201ENST00000525031 1226 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 AC009729.1-201ENST00000548873 1133 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX2-1P43699 LINC00557-201ENST00000563184 1279 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 AC005726.4-201ENST00000582858 458 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 AL159169.2-201ENST00000610061 1269 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX2-1P43699 AL158062.1-201ENST00000619632 745 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX2-1P43699 AC006453.3-201ENST00000635891 377 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 AC232271.1-201ENST00000602455 2715 ntBASIC5.03□□□□□ -1.6
NKX2-1P43699 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX2-1P43699 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX2-1P43699 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX2-1P43699 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-1P43699 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NKX2-1P43699 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-1P43699 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 AC138907.8-201ENST00000623981 2256 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 AC126474.2-201ENST00000623268 1750 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-1P43699 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 Y_RNA.110-201ENST00000363220 99 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 RNA5SP429-201ENST00000363688 109 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 AL672167.2-201ENST00000377164 879 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 RNA5SP105-201ENST00000391123 113 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 CCNB2P1-201ENST00000399411 1150 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-1P43699 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-1P43699 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.02□□□□□ -1.61
NKX2-1P43699 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-1P43699 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.02□□□□□ -1.61
NKX2-1P43699 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-1P43699 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-1P43699 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-1P43699 MORF4-201ENST00000447135 971 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-1P43699 AC124945.1-201ENST00000485133 188 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-1P43699 AC105391.1-201ENST00000503155 1045 ntBASIC5.02□□□□□ -1.61
NKX2-1P43699 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-1P43699 AC093878.1-201ENST00000515630 432 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms