Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ABCD3P28288 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ABCD3P28288 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ABCD3P28288 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.85□□□□□ -1.47
ABCD3P28288 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
ABCD3P28288 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
ABCD3P28288 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
ABCD3P28288 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ABCD3P28288 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ABCD3P28288 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ABCD3P28288 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
ABCD3P28288 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ABCD3P28288 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
ABCD3P28288 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ABCD3P28288 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.84□□□□□ -1.47
ABCD3P28288 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
ABCD3P28288 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
ABCD3P28288 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
ABCD3P28288 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
ABCD3P28288 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ABCD3P28288 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.84□□□□□ -1.47
ABCD3P28288 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
ABCD3P28288 RNA5SP478-201ENST00000364657 115 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.84□□□□□ -1.47
ABCD3P28288 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.84□□□□□ -1.47
ABCD3P28288 RNU6-1320P-201ENST00000390838 107 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 RNU6-1269P-201ENST00000391139 107 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.84□□□□□ -1.47
ABCD3P28288 AL353626.3-201ENST00000413399 657 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 AC112492.2-201ENST00000432774 1030 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.84□□□□□ -1.47
ABCD3P28288 CLNS1AP1-201ENST00000435954 682 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 AL590762.3-201ENST00000436372 640 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
ABCD3P28288 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.84□□□□□ -1.47
ABCD3P28288 AC006326.1-201ENST00000445465 787 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.84□□□□□ -1.47
ABCD3P28288 AC093166.3-201ENST00000448785 303 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.84□□□□□ -1.47
ABCD3P28288 RNU6-599P-201ENST00000459383 107 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 RNU6-1193P-201ENST00000459461 107 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 RN7SL552P-201ENST00000462094 276 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 RPL12P31-201ENST00000478433 450 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 AC106822.1-201ENST00000502647 526 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ABCD3P28288 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.84□□□□□ -1.47
ABCD3P28288 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.84□□□□□ -1.47
ABCD3P28288 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.84□□□□□ -1.47
ABCD3P28288 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.84□□□□□ -1.47
ABCD3P28288 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.84□□□□□ -1.47
ABCD3P28288 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
ABCD3P28288 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.84□□□□□ -1.47
ABCD3P28288 AC005632.2-201ENST00000564271 828 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.84□□□□□ -1.47
ABCD3P28288 MTCO3P22-201ENST00000603219 784 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 KATNBL1P5-201ENST00000605015 517 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 AC005828.7-201ENST00000607331 556 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.84□□□□□ -1.47
ABCD3P28288 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.84□□□□□ -1.47
ABCD3P28288 AL138960.1-201ENST00000613838 513 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 AC024255.1-201ENST00000614376 102 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 AL109620.1-201ENST00000618738 1197 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
ABCD3P28288 MIR7159-201ENST00000620587 66 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 RNU6-368P-201ENST00000620928 107 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 RNU6-538P-201ENST00000622329 107 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 AC018659.2-201ENST00000624690 715 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.84□□□□□ -1.47
ABCD3P28288 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.84□□□□□ -1.47
ABCD3P28288 DOCK11P1-201ENST00000553480 5932 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 MAPK10-287ENST00000641217 3037 ntBASIC5.84□□□□□ -1.47
ABCD3P28288 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
ABCD3P28288 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
ABCD3P28288 CASC19-281ENST00000642118 1554 ntBASIC5.84□□□□□ -1.48
ABCD3P28288 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
ABCD3P28288 AP001002.1-201ENST00000625148 1513 ntBASIC5.84□□□□□ -1.48
ABCD3P28288 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC5.83□□□□□ -1.48
ABCD3P28288 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.83□□□□□ -1.48
ABCD3P28288 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.83□□□□□ -1.48
ABCD3P28288 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.83□□□□□ -1.48
ABCD3P28288 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
ABCD3P28288 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
ABCD3P28288 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.83□□□□□ -1.48
ABCD3P28288 RNU4-7P-201ENST00000364758 141 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AL157702.1-201ENST00000398764 426 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 RNA5SP198-201ENST00000410376 127 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 RPL26P37-201ENST00000411983 438 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AL359885.1-201ENST00000415786 903 ntBASIC5.83□□□□□ -1.48
ABCD3P28288 AL139158.1-201ENST00000424719 340 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms