Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.01□□□□□ -1.45
PCNAP12004 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCNAP12004 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.01□□□□□ -1.45
PCNAP12004 RNA5SP206-201ENST00000516703 121 ntBASIC6.01□□□□□ -1.45
PCNAP12004 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.01□□□□□ -1.45
PCNAP12004 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.01□□□□□ -1.45
PCNAP12004 OR4A42P-201ENST00000531397 938 ntBASIC6.01□□□□□ -1.45
PCNAP12004 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.01□□□□□ -1.45
PCNAP12004 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.01□□□□□ -1.45
PCNAP12004 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC6.01□□□□□ -1.45
PCNAP12004 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.01□□□□□ -1.45
PCNAP12004 AC005972.3-201ENST00000606304 481 ntBASIC6.01□□□□□ -1.45
PCNAP12004 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCNAP12004 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.01□□□□□ -1.45
PCNAP12004 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCNAP12004 MIR6811-201ENST00000620409 58 ntBASIC6.01□□□□□ -1.45
PCNAP12004 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.01□□□□□ -1.45
PCNAP12004 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC6.01□□□□□ -1.45
PCNAP12004 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PCNAP12004 AC015799.1-201ENST00000622996 3122 ntBASIC6.01□□□□□ -1.45
PCNAP12004 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.01□□□□□ -1.45
PCNAP12004 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCNAP12004 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PCNAP12004 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
PCNAP12004 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCNAP12004 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCNAP12004 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCNAP12004 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCNAP12004 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCNAP12004 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PCNAP12004 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCNAP12004 AC096921.2-201ENST00000561507 1916 ntBASIC6□□□□□ -1.45
PCNAP12004 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCNAP12004 RNU6-670P-201ENST00000364312 104 ntBASIC6□□□□□ -1.45
PCNAP12004 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCNAP12004 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6□□□□□ -1.45
PCNAP12004 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6□□□□□ -1.45
PCNAP12004 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6□□□□□ -1.45
PCNAP12004 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6□□□□□ -1.45
PCNAP12004 RCC2P2-201ENST00000422174 918 ntBASIC6□□□□□ -1.45
PCNAP12004 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6□□□□□ -1.45
PCNAP12004 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PCNAP12004 FTLP19-201ENST00000433300 394 ntBASIC6□□□□□ -1.45
PCNAP12004 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6□□□□□ -1.45
PCNAP12004 SOCS5P1-201ENST00000440415 949 ntBASIC6□□□□□ -1.45
PCNAP12004 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6□□□□□ -1.45
PCNAP12004 RPL12P49-201ENST00000441100 121 ntBASIC6□□□□□ -1.45
PCNAP12004 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC6□□□□□ -1.45
PCNAP12004 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC6□□□□□ -1.45
PCNAP12004 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6□□□□□ -1.45
PCNAP12004 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6□□□□□ -1.45
PCNAP12004 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6□□□□□ -1.45
PCNAP12004 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6□□□□□ -1.45
PCNAP12004 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6□□□□□ -1.45
PCNAP12004 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6□□□□□ -1.45
PCNAP12004 RN7SL326P-201ENST00000477493 296 ntBASIC6□□□□□ -1.45
PCNAP12004 SNRPCP11-201ENST00000492453 205 ntBASIC6□□□□□ -1.45
PCNAP12004 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6□□□□□ -1.45
PCNAP12004 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6□□□□□ -1.45
PCNAP12004 OR4D12P-201ENST00000509361 911 ntBASIC6□□□□□ -1.45
PCNAP12004 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC6□□□□□ -1.45
PCNAP12004 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PCNAP12004 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6□□□□□ -1.45
PCNAP12004 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6□□□□□ -1.45
PCNAP12004 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6□□□□□ -1.45
PCNAP12004 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6□□□□□ -1.45
PCNAP12004 LINC00556-201ENST00000569603 412 ntBASIC6□□□□□ -1.45
PCNAP12004 AC010547.7-201ENST00000570323 333 ntBASIC6□□□□□ -1.45
PCNAP12004 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC6□□□□□ -1.45
PCNAP12004 NPIPB1P-202ENST00000588786 828 ntBASIC6□□□□□ -1.45
PCNAP12004 FAM60CP-201ENST00000591086 664 ntBASIC6□□□□□ -1.45
PCNAP12004 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6□□□□□ -1.45
PCNAP12004 AC003992.1-201ENST00000635364 557 ntBASIC6□□□□□ -1.45
PCNAP12004 HDAC1P2-201ENST00000453661 1398 ntBASIC6□□□□□ -1.45
PCNAP12004 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCNAP12004 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PCNAP12004 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
PCNAP12004 AC004656.1-201ENST00000568479 4951 ntBASIC6□□□□□ -1.45
PCNAP12004 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
PCNAP12004 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6□□□□□ -1.45
PCNAP12004 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
PCNAP12004 CCNT2P1-201ENST00000423082 1315 ntBASIC5.99□□□□□ -1.45
PCNAP12004 AL929601.4-201ENST00000613011 1341 ntBASIC5.99□□□□□ -1.45
PCNAP12004 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.99□□□□□ -1.45
PCNAP12004 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
PCNAP12004 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PCNAP12004 AC093849.1-201ENST00000563631 2209 ntBASIC5.99□□□□□ -1.45
PCNAP12004 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PCNAP12004 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.99□□□□□ -1.45
PCNAP12004 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCNAP12004 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCNAP12004 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.99□□□□□ -1.45
PCNAP12004 AC022164.1-201ENST00000568767 2673 ntBASIC5.99□□□□□ -1.45
PCNAP12004 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.99□□□□□ -1.45
PCNAP12004 AC092692.1-201ENST00000623625 2595 ntBASIC5.99□□□□□ -1.45
PCNAP12004 AC024651.2-201ENST00000562480 2098 ntBASIC5.99□□□□□ -1.45
PCNAP12004 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCNAP12004 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.99□□□□□ -1.45
PCNAP12004 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PCNAP12004 SNORA43.1-201ENST00000364863 140 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms