Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGN1P05114 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGN1P05114 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
HMGN1P05114 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.41□□□□□ -1.54
HMGN1P05114 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
HMGN1P05114 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGN1P05114 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGN1P05114 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGN1P05114 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGN1P05114 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGN1P05114 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGN1P05114 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGN1P05114 AC138907.8-201ENST00000623981 2256 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 MTCO1P46-201ENST00000451639 1491 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGN1P05114 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGN1P05114 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGN1P05114 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGN1P05114 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
HMGN1P05114 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGN1P05114 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGN1P05114 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGN1P05114 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.4□□□□□ -1.54
HMGN1P05114 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGN1P05114 AC096632.2-201ENST00000438139 1239 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 RPL5P25-201ENST00000441148 775 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 AL645936.1-201ENST00000441979 518 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGN1P05114 AL445991.1-201ENST00000450381 475 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 AL034369.1-201ENST00000453808 477 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 FRG2FP-204ENST00000453982 852 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 RN7SL39P-201ENST00000462264 297 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
HMGN1P05114 PFN1P6-201ENST00000476786 399 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGN1P05114 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGN1P05114 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGN1P05114 AC111000.6-201ENST00000514471 709 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 AL671862.1-201ENST00000515851 349 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 RNU6-513P-201ENST00000516104 104 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGN1P05114 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGN1P05114 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.4□□□□□ -1.54
HMGN1P05114 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.4□□□□□ -1.54
HMGN1P05114 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
HMGN1P05114 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.4□□□□□ -1.54
HMGN1P05114 AC025283.1-201ENST00000572039 734 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 COX6CP7-201ENST00000597056 208 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 AL390877.1-201ENST00000605704 214 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 Z93930.3-201ENST00000607919 749 ntBASIC5.4□□□□□ -1.54
HMGN1P05114 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGN1P05114 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.4□□□□□ -1.54
HMGN1P05114 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.4□□□□□ -1.55
HMGN1P05114 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.4□□□□□ -1.55
HMGN1P05114 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
HMGN1P05114 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.4□□□□□ -1.55
HMGN1P05114 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HMGN1P05114 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.4□□□□□ -1.55
HMGN1P05114 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.4□□□□□ -1.55
HMGN1P05114 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
HMGN1P05114 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
HMGN1P05114 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.4□□□□□ -1.55
HMGN1P05114 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGN1P05114 AC217777.1-201ENST00000570034 1471 ntBASIC5.39□□□□□ -1.55
HMGN1P05114 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGN1P05114 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGN1P05114 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGN1P05114 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGN1P05114 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGN1P05114 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
HMGN1P05114 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
HMGN1P05114 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGN1P05114 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGN1P05114 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
HMGN1P05114 RNA5SP211-201ENST00000365516 117 ntBASIC5.39□□□□□ -1.55
HMGN1P05114 SNORD94-201ENST00000386037 137 ntBASIC5.39□□□□□ -1.55
HMGN1P05114 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.39□□□□□ -1.55
HMGN1P05114 MTND2P12-201ENST00000417560 1252 ntBASIC5.39□□□□□ -1.55
HMGN1P05114 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGN1P05114 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGN1P05114 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGN1P05114 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGN1P05114 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGN1P05114 AC010240.2-201ENST00000445363 1205 ntBASIC5.39□□□□□ -1.55
HMGN1P05114 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
HMGN1P05114 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGN1P05114 RN7SL188P-201ENST00000469842 285 ntBASIC5.39□□□□□ -1.55
HMGN1P05114 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGN1P05114 AC095052.1-201ENST00000509955 863 ntBASIC5.39□□□□□ -1.55
HMGN1P05114 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGN1P05114 TMEM97P2-201ENST00000517841 403 ntBASIC5.39□□□□□ -1.55
HMGN1P05114 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGN1P05114 AC090424.1-201ENST00000535243 736 ntBASIC5.39□□□□□ -1.55
HMGN1P05114 TDGP1-201ENST00000543961 1229 ntBASIC5.39□□□□□ -1.55
HMGN1P05114 AC084824.2-201ENST00000548906 345 ntBASIC5.39□□□□□ -1.55
HMGN1P05114 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.39□□□□□ -1.55
HMGN1P05114 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGN1P05114 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.39□□□□□ -1.55
HMGN1P05114 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.39□□□□□ -1.55
HMGN1P05114 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms