Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AC018809.2-201ENST00000602436 3823 ntBASIC4.44□□□□□ -1.7
HLA-DQA1P01909 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HLA-DQA1P01909 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 SMG1P5-202ENST00000529428 4219 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 SMG1P2-201ENST00000566127 4221 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC011755.1-201ENST00000623763 2049 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC010132.4-201ENST00000569883 1368 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC092681.1-201ENST00000297369 291 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 SNORA7A-201ENST00000384765 139 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 MIR188-201ENST00000385034 86 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 RANP6-201ENST00000413691 644 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 HYALP1-201ENST00000417674 1279 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 TRBV29OR9-2-201ENST00000427589 333 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 ATP6V1G1P4-201ENST00000438388 335 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 GAPDHP23-201ENST00000444823 993 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 RN7SL72P-201ENST00000460697 269 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 UCK2-205ENST00000469256 753 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 RN7SL267P-201ENST00000485107 261 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 RPL24-206ENST00000495401 478 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC122714.1-201ENST00000502510 459 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 RNU2-45P-201ENST00000516068 187 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 TPRX1P1-201ENST00000557620 319 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC106730.2-201ENST00000566641 540 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 MIR378H-201ENST00000579966 83 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 RPS4XP21-201ENST00000603814 750 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 RN7SL261P-201ENST00000613441 282 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC005514.1-201ENST00000623521 208 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 CLUHP10-201ENST00000631979 980 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC073488.6-201ENST00000632293 754 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 HCFC2P1-201ENST00000392864 1592 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC015689.2-201ENST00000528172 1738 ntBASIC4.43□□□□□ -1.7
HLA-DQA1P01909 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
HLA-DQA1P01909 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 OR9K1P-201ENST00000326513 941 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 RN7SKP91-201ENST00000410852 288 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 ETF1P1-206ENST00000427296 984 ntBASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.42□□□□□ -1.7
HLA-DQA1P01909 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms