Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFBP01127 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PDGFBP01127 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC6.12□□□□□ -1.43
PDGFBP01127 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.12□□□□□ -1.43
PDGFBP01127 MRPL53P1-201ENST00000414323 319 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.12□□□□□ -1.43
PDGFBP01127 KIF4CP-201ENST00000422742 1279 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 NPM1P48-201ENST00000436002 853 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 Z80107.2-201ENST00000445127 392 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.12□□□□□ -1.43
PDGFBP01127 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.12□□□□□ -1.43
PDGFBP01127 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
PDGFBP01127 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.12□□□□□ -1.43
PDGFBP01127 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC6.12□□□□□ -1.43
PDGFBP01127 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFBP01127 HMGN2P36-201ENST00000529541 409 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 GUCY1B2-204ENST00000531898 1979 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.12□□□□□ -1.43
PDGFBP01127 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.12□□□□□ -1.43
PDGFBP01127 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.12□□□□□ -1.43
PDGFBP01127 HMGN2P6-201ENST00000551091 273 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 AL049872.1-201ENST00000556323 322 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 RN7SL708P-201ENST00000580952 299 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFBP01127 AC011455.2-201ENST00000599320 3336 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 AC008115.3-201ENST00000614874 549 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 OR1N1-202ENST00000619659 939 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 AC241377.1-201ENST00000619797 406 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.12□□□□□ -1.43
PDGFBP01127 CASC19-264ENST00000641912 1184 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PDGFBP01127 PARP4P2-201ENST00000446672 3326 ntBASIC6.12□□□□□ -1.43
PDGFBP01127 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PDGFBP01127 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PDGFBP01127 AC023421.1-201ENST00000590535 1785 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 PMFBP1-201ENST00000237353 3527 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
PDGFBP01127 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 CASC19-248ENST00000641674 1356 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PDGFBP01127 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 AL023284.3-201ENST00000407767 334 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.11□□□□□ -1.43
PDGFBP01127 AC013268.2-201ENST00000420753 337 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.11□□□□□ -1.43
PDGFBP01127 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFBP01127 HMGB1P32-201ENST00000425971 565 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFBP01127 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.11□□□□□ -1.43
PDGFBP01127 AL450996.1-201ENST00000445574 1202 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 AC016027.4-201ENST00000450866 277 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFBP01127 AC024558.1-201ENST00000505008 528 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 AC138409.2-202ENST00000507274 458 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFBP01127 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFBP01127 AC009120.3-201ENST00000563335 499 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFBP01127 AL512329.2-201ENST00000607350 548 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFBP01127 AC079414.3-201ENST00000612986 1090 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 AL731566.2-201ENST00000618971 317 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.11□□□□□ -1.43
PDGFBP01127 AL132640.3-201ENST00000630473 177 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFBP01127 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFBP01127 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 AL596244.1-201ENST00000567068 3779 ntBASIC6.11□□□□□ -1.43
PDGFBP01127 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFBP01127 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFBP01127 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFBP01127 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PDGFBP01127 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PDGFBP01127 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PDGFBP01127 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFBP01127 AL355377.1-201ENST00000621125 1653 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
PDGFBP01127 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PDGFBP01127 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms