Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.61□□□□□ -1.51
SCN2BO60939 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN2BO60939 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SCN2BO60939 AC130360.1-201ENST00000425489 1117 ntBASIC5.61□□□□□ -1.51
SCN2BO60939 RPL5P2-201ENST00000429598 854 ntBASIC5.61□□□□□ -1.51
SCN2BO60939 AC023141.3-201ENST00000436698 278 ntBASIC5.61□□□□□ -1.51
SCN2BO60939 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN2BO60939 TRIM60P16-201ENST00000444048 694 ntBASIC5.61□□□□□ -1.51
SCN2BO60939 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN2BO60939 AL161722.1-201ENST00000446972 1032 ntBASIC5.61□□□□□ -1.51
SCN2BO60939 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN2BO60939 AC090589.1-201ENST00000473109 362 ntBASIC5.61□□□□□ -1.51
SCN2BO60939 OR7E99P-201ENST00000505750 922 ntBASIC5.61□□□□□ -1.51
SCN2BO60939 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 AC130365.2-201ENST00000525882 1201 ntBASIC5.61□□□□□ -1.51
SCN2BO60939 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN2BO60939 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN2BO60939 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN2BO60939 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.61□□□□□ -1.51
SCN2BO60939 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN2BO60939 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN2BO60939 AC015819.1-201ENST00000613588 663 ntBASIC5.61□□□□□ -1.51
SCN2BO60939 RNA5SP439-201ENST00000617595 124 ntBASIC5.61□□□□□ -1.51
SCN2BO60939 AC022400.9-201ENST00000623633 273 ntBASIC5.61□□□□□ -1.51
SCN2BO60939 AC016542.2-201ENST00000624201 619 ntBASIC5.61□□□□□ -1.51
SCN2BO60939 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN2BO60939 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN2BO60939 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.61□□□□□ -1.51
SCN2BO60939 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SCN2BO60939 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SCN2BO60939 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN2BO60939 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN2BO60939 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
SCN2BO60939 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN2BO60939 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN2BO60939 RNU1-134P-201ENST00000362935 165 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCN2BO60939 AL096711.1-201ENST00000404780 554 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN2BO60939 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.6□□□□□ -1.51
SCN2BO60939 AC117434.1-201ENST00000419971 836 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AC009506.2-201ENST00000420635 840 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 RPL7AP51-201ENST00000422016 760 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AC099677.3-201ENST00000427081 395 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 RPSAP32-201ENST00000432681 526 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SCN2BO60939 AC096775.1-201ENST00000437724 448 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN2BO60939 RPS7P3-201ENST00000443360 580 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN2BO60939 Z83838.1-202ENST00000456225 839 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 PFN1P6-201ENST00000476786 399 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN2BO60939 AC083795.1-201ENST00000491760 320 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AC106822.1-201ENST00000502647 526 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.6□□□□□ -1.51
SCN2BO60939 MIR2117-201ENST00000516780 80 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AC136777.2-201ENST00000522979 358 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AP001000.1-201ENST00000526843 742 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN2BO60939 AL121594.2-201ENST00000541658 472 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN2BO60939 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN2BO60939 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN2BO60939 MT1CP-201ENST00000567054 174 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AL163952.1-202ENST00000569625 600 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AC004232.2-201ENST00000574245 821 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN2BO60939 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.6□□□□□ -1.51
SCN2BO60939 AL135999.3-201ENST00000610501 812 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 HTR1DP1-201ENST00000616500 888 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 RFPL4AP6-201ENST00000616792 846 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 AL512652.1-201ENST00000619006 500 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SCN2BO60939 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.6□□□□□ -1.51
SCN2BO60939 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN2BO60939 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN2BO60939 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SCN2BO60939 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN2BO60939 AC083837.1-201ENST00000565297 2994 ntBASIC5.6□□□□□ -1.51
SCN2BO60939 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SCN2BO60939 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN2BO60939 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.6□□□□□ -1.51
SCN2BO60939 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
SCN2BO60939 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SCN2BO60939 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SCN2BO60939 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN2BO60939 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
SCN2BO60939 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN2BO60939 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN2BO60939 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SCN2BO60939 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
SCN2BO60939 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SCN2BO60939 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
SCN2BO60939 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
SCN2BO60939 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
SCN2BO60939 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms