Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC188H7C350 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CCDC188H7C350 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CCDC188H7C350 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
CCDC188H7C350 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.14□□□□□ -1.43
CCDC188H7C350 NCOA4P2-201ENST00000340589 1813 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC188H7C350 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
CCDC188H7C350 RPL11P4-201ENST00000332269 436 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 RNU1-136P-201ENST00000384181 164 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 SNORD94-201ENST00000386037 137 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 RNA5SP91-201ENST00000390902 119 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 AL139805.1-201ENST00000407837 289 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC188H7C350 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC188H7C350 VTI1BP4-201ENST00000427516 527 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 TPTE2P1-204ENST00000435256 593 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC188H7C350 AL645936.1-201ENST00000441979 518 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 RPL31P11-202ENST00000454082 372 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 RPL36AP55-201ENST00000454114 305 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 RARRES2P3-201ENST00000457739 473 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC188H7C350 RNU1-88P-201ENST00000459274 128 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC188H7C350 AC114324.2-202ENST00000503812 134 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 AC105420.1-201ENST00000504389 582 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.13□□□□□ -1.43
CCDC188H7C350 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC188H7C350 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
CCDC188H7C350 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC188H7C350 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC188H7C350 HNRNPRP2-201ENST00000528421 743 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 OR4A43P-201ENST00000532938 908 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 SLC25A51P2-201ENST00000535708 889 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC188H7C350 AC068408.1-201ENST00000577406 1144 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC188H7C350 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.13□□□□□ -1.43
CCDC188H7C350 AL022394.1-201ENST00000606979 292 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 AC007786.3-201ENST00000615154 596 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC188H7C350 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC188H7C350 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.13□□□□□ -1.43
CCDC188H7C350 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC188H7C350 AL121839.2-201ENST00000565058 6943 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 AC018717.1-201ENST00000457712 1505 ntBASIC6.13□□□□□ -1.43
CCDC188H7C350 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC188H7C350 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC188H7C350 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC188H7C350 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.13□□□□□ -1.43
CCDC188H7C350 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC188H7C350 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC188H7C350 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC188H7C350 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
CCDC188H7C350 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC188H7C350 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CCDC188H7C350 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC188H7C350 AL137058.3-201ENST00000624531 3099 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC188H7C350 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC188H7C350 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC188H7C350 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC188H7C350 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCDC188H7C350 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CCDC188H7C350 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC188H7C350 MIR27A-201ENST00000385073 78 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC188H7C350 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC188H7C350 MIR1266-201ENST00000408125 84 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 CASKP1-201ENST00000412870 582 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 OR10T1P-201ENST00000424327 947 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC188H7C350 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC188H7C350 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.12□□□□□ -1.43
CCDC188H7C350 HMGN1P32-201ENST00000441744 256 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 SEPT14P12-201ENST00000442280 560 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 TRIM60P16-201ENST00000444048 694 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC188H7C350 RPS18P1-201ENST00000447840 458 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 SLAMF6P1-201ENST00000451067 602 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC188H7C350 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC188H7C350 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC188H7C350 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC188H7C350 NPM1P21-201ENST00000513394 762 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 AC110056.1-201ENST00000525759 911 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.12□□□□□ -1.43
CCDC188H7C350 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CCDC188H7C350 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.12□□□□□ -1.43
CCDC188H7C350 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.12□□□□□ -1.43
CCDC188H7C350 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.12□□□□□ -1.43
CCDC188H7C350 AC217777.1-201ENST00000570034 1471 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 AC010547.7-201ENST00000570323 333 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 MIR4732-201ENST00000581873 76 ntBASIC6.12□□□□□ -1.43
CCDC188H7C350 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.12□□□□□ -1.43
CCDC188H7C350 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms