Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
RIMBP3Q9UFD9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC31.64■■■□□ 2.65
RIMBP3Q9UFD9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC31.64■■■□□ 2.65
RIMBP3Q9UFD9 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC31.64■■■□□ 2.65
RIMBP3Q9UFD9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC31.64■■■□□ 2.65
RIMBP3Q9UFD9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.65
RIMBP3Q9UFD9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 CHCHD2P8-201ENST00000429873 447 ntBASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 Z85996.1-201ENST00000494644 937 ntBASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 KRT8P36-201ENST00000489121 1440 ntBASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
RIMBP3Q9UFD9 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
RIMBP3Q9UFD9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
RIMBP3Q9UFD9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
RIMBP3Q9UFD9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
RIMBP3Q9UFD9 FOSL1P1-201ENST00000511041 816 ntBASIC31.61■■■□□ 2.65
RIMBP3Q9UFD9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
RIMBP3Q9UFD9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC31.61■■■□□ 2.65
RIMBP3Q9UFD9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 AKR1C7P-201ENST00000305623 895 ntBASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 MIR564-202ENST00000385049 94 ntBASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 AC005104.2-201ENST00000427818 678 ntBASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 AC011498.5-201ENST00000592027 486 ntBASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 AC140113.2-201ENST00000604370 208 ntBASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 AP001005.1-201ENST00000571755 1248 ntBASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 TP73-AS1-207ENST00000624167 988 ntBASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC31.6■■■□□ 2.65
RIMBP3Q9UFD9 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RIMBP3Q9UFD9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RIMBP3Q9UFD9 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
RIMBP3Q9UFD9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RIMBP3Q9UFD9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RIMBP3Q9UFD9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
RIMBP3Q9UFD9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC31.59■■■□□ 2.65
RIMBP3Q9UFD9 AC092597.1-201ENST00000487352 616 ntBASIC31.59■■■□□ 2.65
RIMBP3Q9UFD9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC31.59■■■□□ 2.65
RIMBP3Q9UFD9 CIB2-208ENST00000560618 804 ntTSL 2 BASIC31.59■■■□□ 2.65
RIMBP3Q9UFD9 AL691403.2-201ENST00000618460 490 ntBASIC31.59■■■□□ 2.65
RIMBP3Q9UFD9 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RIMBP3Q9UFD9 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC31.58■■■□□ 2.65
RIMBP3Q9UFD9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RIMBP3Q9UFD9 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC31.58■■■□□ 2.65
RIMBP3Q9UFD9 TUBB8P6-201ENST00000436895 1288 ntBASIC31.58■■■□□ 2.65
RIMBP3Q9UFD9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RIMBP3Q9UFD9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC31.58■■■□□ 2.65
RIMBP3Q9UFD9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
RIMBP3Q9UFD9 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
RIMBP3Q9UFD9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RIMBP3Q9UFD9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
RIMBP3Q9UFD9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
RIMBP3Q9UFD9 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC31.57■■■□□ 2.65
RIMBP3Q9UFD9 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
RIMBP3Q9UFD9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC31.57■■■□□ 2.65
RIMBP3Q9UFD9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RIMBP3Q9UFD9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC31.57■■■□□ 2.64
RIMBP3Q9UFD9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC31.57■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms