Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PDLIM5Q96HC4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.27■□□□□ 0.68
PDLIM5Q96HC4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
PDLIM5Q96HC4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDLIM5Q96HC4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PDLIM5Q96HC4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PDLIM5Q96HC4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 AC120498.8-201ENST00000614275 531 ntBASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.26■□□□□ 0.67
PDLIM5Q96HC4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PDLIM5Q96HC4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 AC124283.5-201ENST00000624661 1809 ntBASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PDLIM5Q96HC4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms