Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP9XQ93008 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP9XQ93008 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
USP9XQ93008 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.27■□□□□ 0.35
USP9XQ93008 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP9XQ93008 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.26■□□□□ 0.35
USP9XQ93008 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.26■□□□□ 0.35
USP9XQ93008 SPDYE13P-201ENST00000445314 798 ntBASIC17.26■□□□□ 0.35
USP9XQ93008 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.26■□□□□ 0.35
USP9XQ93008 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.26■□□□□ 0.35
USP9XQ93008 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.26■□□□□ 0.35
USP9XQ93008 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
USP9XQ93008 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP9XQ93008 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.26■□□□□ 0.35
USP9XQ93008 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP9XQ93008 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.26■□□□□ 0.35
USP9XQ93008 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP9XQ93008 EMBP1-201ENST00000458200 901 ntBASIC17.26■□□□□ 0.35
USP9XQ93008 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.26■□□□□ 0.35
USP9XQ93008 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP9XQ93008 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP9XQ93008 AC117500.6-201ENST00000624871 588 ntBASIC17.26■□□□□ 0.35
USP9XQ93008 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
USP9XQ93008 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP9XQ93008 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP9XQ93008 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP9XQ93008 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
USP9XQ93008 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP9XQ93008 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
USP9XQ93008 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.25■□□□□ 0.35
USP9XQ93008 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.25■□□□□ 0.35
USP9XQ93008 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP9XQ93008 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP9XQ93008 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP9XQ93008 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP9XQ93008 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
USP9XQ93008 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
USP9XQ93008 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
USP9XQ93008 AP000523.1-201ENST00000398242 1049 ntBASIC17.25■□□□□ 0.35
USP9XQ93008 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.25■□□□□ 0.35
USP9XQ93008 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.25■□□□□ 0.35
USP9XQ93008 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.25■□□□□ 0.35
USP9XQ93008 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.25■□□□□ 0.35
USP9XQ93008 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
USP9XQ93008 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP9XQ93008 AC131212.4-201ENST00000623606 975 ntBASIC17.25■□□□□ 0.35
USP9XQ93008 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
USP9XQ93008 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
USP9XQ93008 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.24■□□□□ 0.35
USP9XQ93008 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.24■□□□□ 0.35
USP9XQ93008 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.24■□□□□ 0.35
USP9XQ93008 AL732292.2-201ENST00000609649 430 ntBASIC17.24■□□□□ 0.35
USP9XQ93008 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.24■□□□□ 0.35
USP9XQ93008 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP9XQ93008 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.24■□□□□ 0.35
USP9XQ93008 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP9XQ93008 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.24■□□□□ 0.35
USP9XQ93008 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.24■□□□□ 0.35
USP9XQ93008 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
USP9XQ93008 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.24■□□□□ 0.35
USP9XQ93008 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP9XQ93008 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
USP9XQ93008 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
USP9XQ93008 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP9XQ93008 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
USP9XQ93008 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
USP9XQ93008 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
USP9XQ93008 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.23■□□□□ 0.35
USP9XQ93008 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP9XQ93008 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP9XQ93008 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP9XQ93008 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP9XQ93008 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.23■□□□□ 0.35
USP9XQ93008 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.23■□□□□ 0.35
USP9XQ93008 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.23■□□□□ 0.35
USP9XQ93008 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.23■□□□□ 0.35
USP9XQ93008 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP9XQ93008 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
USP9XQ93008 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
USP9XQ93008 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.23■□□□□ 0.35
USP9XQ93008 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
USP9XQ93008 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.22■□□□□ 0.35
USP9XQ93008 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.22■□□□□ 0.35
USP9XQ93008 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.22■□□□□ 0.35
USP9XQ93008 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
USP9XQ93008 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP9XQ93008 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP9XQ93008 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.22■□□□□ 0.35
USP9XQ93008 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.22■□□□□ 0.35
USP9XQ93008 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.22■□□□□ 0.35
USP9XQ93008 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
USP9XQ93008 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP9XQ93008 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
USP9XQ93008 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP9XQ93008 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
USP9XQ93008 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP9XQ93008 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC17.21■□□□□ 0.35
USP9XQ93008 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP9XQ93008 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
USP9XQ93008 AP002469.2-201ENST00000531724 424 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms