Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Gm44549-201ENSMUST00000208351 577 ntBASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Pcdh18Q8VHR0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Pcdh18Q8VHR0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Gm38285-201ENSMUST00000192928 922 ntBASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Pcdh18Q8VHR0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh18Q8VHR0 Idnk-204ENSMUST00000226010 1898 ntBASIC16.33■□□□□ 0.21
Pcdh18Q8VHR0 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Pcdh18Q8VHR0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Gm13148-201ENSMUST00000118892 745 ntBASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Pcdh18Q8VHR0 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms