Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 STAT2-201ENST00000314128 3259 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.91e-6■■□□□ 13.5
SRSF1Q07955 THAP9-AS1-212ENST00000513581 683 ntTSL 29.33□□□□□ -0.921e-6■■□□□ 13.5
SRSF1Q07955 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC9.24□□□□□ -0.931e-6■■□□□ 13.5
SRSF1Q07955 CEP85-202ENST00000451429 4061 ntTSL 2 BASIC9.14□□□□□ -0.951e-6■■□□□ 13.5
SRSF1Q07955 WDR27-205ENST00000467418 947 ntTSL 59.08□□□□□ -0.968e-7■■□□□ 13.5
SRSF1Q07955 THAP9-AS1-207ENST00000507660 550 ntTSL 39.08□□□□□ -0.961e-6■■□□□ 13.5
SRSF1Q07955 THAP9-AS1-208ENST00000508772 566 ntTSL 48.75□□□□□ -1.011e-6■■□□□ 13.5
SRSF1Q07955 THAP9-AS1-201ENST00000503704 637 ntTSL 28.75□□□□□ -1.011e-6■■□□□ 13.5
SRSF1Q07955 THAP9-AS1-209ENST00000509007 566 ntTSL 48.75□□□□□ -1.011e-6■■□□□ 13.5
SRSF1Q07955 THAP9-AS1-210ENST00000511271 516 ntTSL 28.22□□□□□ -1.091e-6■■□□□ 13.5
SRSF1Q07955 THAP9-AS1-205ENST00000504869 535 ntTSL 48.22□□□□□ -1.091e-6■■□□□ 13.5
SRSF1Q07955 STAT2-210ENST00000557235 3073 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.191e-6■■□□□ 13.5
SRSF1Q07955 THAP9-AS1-204ENST00000504792 2577 ntTSL 2 BASIC7.41□□□□□ -1.221e-6■■□□□ 13.5
SRSF1Q07955 CEP85-206ENST00000476272 3507 ntTSL 27.22□□□□□ -1.251e-6■■□□□ 13.5
SRSF1Q07955 NUP214-201ENST00000359428 7600 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.261e-6■■□□□ 13.5
SRSF1Q07955 SCLY-220ENST00000497951 3800 ntTSL 26.81□□□□□ -1.323e-8■■□□□ 13.5
SRSF1Q07955 NUP214-215ENST00000525980 2274 ntTSL 26.7□□□□□ -1.341e-6■■□□□ 13.5
SRSF1Q07955 THAP9-AS1-206ENST00000505028 552 ntTSL 46.7□□□□□ -1.341e-6■■□□□ 13.5
SRSF1Q07955 THAP9-AS1-203ENST00000504718 573 ntTSL 46.44□□□□□ -1.381e-6■■□□□ 13.5
SRSF1Q07955 STAT2-209ENST00000557199 662 ntTSL 46.29□□□□□ -1.41e-6■■□□□ 13.5
SRSF1Q07955 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.41e-6■■□□□ 13.5
SRSF1Q07955 THAP9-AS1-211ENST00000512932 971 ntTSL 26.24□□□□□ -1.411e-6■■□□□ 13.5
SRSF1Q07955 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.461e-6■■□□□ 13.5
SRSF1Q07955 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.415e-7■■□□□ 13.5
SRSF1Q07955 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.51■□□□□ 0.235e-7■■□□□ 13.5
SRSF1Q07955 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.37■□□□□ 0.215e-7■■□□□ 13.5
SRSF1Q07955 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.215e-7■■□□□ 13.5
SRSF1Q07955 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.035e-7■■□□□ 13.5
SRSF1Q07955 ZGPAT-209ENST00000477340 2831 ntTSL 212.75□□□□□ -0.375e-7■■□□□ 13.5
SRSF1Q07955 PRPSAP1-204ENST00000436498 1003 ntTSL 318.71■□□□□ 0.593e-15■■□□□ 13.5
SRSF1Q07955 TES-204ENST00000455989 577 ntTSL 320.55■□□□□ 0.889e-11■■□□□ 13.5
SRSF1Q07955 TES-210ENST00000496871 961 ntTSL 1 (best)19.65■□□□□ 0.749e-11■■□□□ 13.5
SRSF1Q07955 TES-208ENST00000492891 1022 ntTSL 216.9■□□□□ 0.39e-11■■□□□ 13.5
SRSF1Q07955 TES-205ENST00000461440 873 ntTSL 214.62□□□□□ -0.079e-11■■□□□ 13.5
SRSF1Q07955 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.219e-11■■□□□ 13.5
SRSF1Q07955 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.615e-7■■□□□ 13.5
SRSF1Q07955 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.2□□□□□ -1.425e-7■■□□□ 13.5
SRSF1Q07955 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.743e-15■■□□□ 13.5
SRSF1Q07955 PRPSAP1-208ENST00000488339 443 ntTSL 29.25□□□□□ -0.933e-15■■□□□ 13.5
SRSF1Q07955 PRPSAP1-203ENST00000435555 916 ntTSL 59.06□□□□□ -0.963e-15■■□□□ 13.5
SRSF1Q07955 PRPSAP1-210ENST00000586137 473 ntTSL 39.06□□□□□ -0.963e-15■■□□□ 13.5
SRSF1Q07955 PRPSAP1-201ENST00000324684 1678 ntTSL 2 BASIC8.52□□□□□ -1.053e-15■■□□□ 13.5
SRSF1Q07955 PRPSAP1-207ENST00000472686 561 ntTSL 28.12□□□□□ -1.113e-15■■□□□ 13.5
SRSF1Q07955 PRPSAP1-212ENST00000592474 1898 nt8.32□□□□□ -1.082e-15■■□□□ 13.5
SRSF1Q07955 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.873e-9■■□□□ 13.5
SRSF1Q07955 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.922e-6■■□□□ 13.5
SRSF1Q07955 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.99□□□□□ -1.932e-6■■□□□ 13.5
SRSF1Q07955 USP15-210ENST00000548836 579 ntTSL 35.7□□□□□ -1.56e-7■■□□□ 13.5
SRSF1Q07955 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.463e-7■■□□□ 13.5
SRSF1Q07955 ELP1-204ENST00000537196 3823 ntTSL 1 (best) BASIC9.3□□□□□ -0.923e-7■■□□□ 13.5
SRSF1Q07955 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.81□□□□□ -0.361e-7■■□□□ 13.5
SRSF1Q07955 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)8.04□□□□□ -1.121e-7■■□□□ 13.5
SRSF1Q07955 PSME2-203ENST00000558273 1502 ntTSL 215.24■□□□□ 0.032e-6■■□□□ 13.5
SRSF1Q07955 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.282e-6■■□□□ 13.5
SRSF1Q07955 PSME2-204ENST00000558931 2754 ntTSL 511.32□□□□□ -0.62e-6■■□□□ 13.5
SRSF1Q07955 SUN1-222ENST00000457861 2975 ntTSL 212.29□□□□□ -0.443e-8■■□□□ 13.5
SRSF1Q07955 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.693e-8■■□□□ 13.5
SRSF1Q07955 NONO-202ENST00000373841 2606 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.883e-8■■□□□ 13.5
SRSF1Q07955 NONO-205ENST00000418921 703 ntTSL 59.09□□□□□ -0.953e-8■■□□□ 13.5
SRSF1Q07955 NONO-211ENST00000473525 1430 ntTSL 58.41□□□□□ -1.063e-8■■□□□ 13.5
SRSF1Q07955 NONO-215ENST00000535149 2882 ntTSL 2 BASIC8.37□□□□□ -1.073e-8■■□□□ 13.5
SRSF1Q07955 NONO-212ENST00000474431 644 ntTSL 58.24□□□□□ -1.093e-8■■□□□ 13.5
SRSF1Q07955 NONO-201ENST00000276079 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.143e-8■■□□□ 13.5
SRSF1Q07955 NONO-204ENST00000413858 855 ntTSL 37.26□□□□□ -1.253e-8■■□□□ 13.5
SRSF1Q07955 NONO-210ENST00000472185 397 ntTSL 56.91□□□□□ -1.33e-8■■□□□ 13.5
SRSF1Q07955 NONO-214ENST00000490044 3215 ntTSL 26.55□□□□□ -1.363e-8■■□□□ 13.5
SRSF1Q07955 NONO-209ENST00000471419 846 ntTSL 25.97□□□□□ -1.453e-8■■□□□ 13.5
SRSF1Q07955 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.32■□□□□ 0.682e-6■■□□□ 13.5
SRSF1Q07955 ASL-202ENST00000362000 928 ntTSL 219.28■□□□□ 0.682e-6■■□□□ 13.5
SRSF1Q07955 ASL-207ENST00000487982 1007 ntTSL 218.41■□□□□ 0.542e-6■■□□□ 13.5
SRSF1Q07955 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.342e-6■■□□□ 13.5
SRSF1Q07955 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.73■□□□□ 0.112e-6■■□□□ 13.5
SRSF1Q07955 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.342e-6■■□□□ 13.5
SRSF1Q07955 ASPSCR1-216ENST00000583503 641 ntTSL 317.31■□□□□ 0.368e-32■■□□□ 13.4
SRSF1Q07955 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.718e-8■■□□□ 13.4
SRSF1Q07955 PHPT1-205ENST00000492540 1316 ntTSL 1 (best)18.93■□□□□ 0.628e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.578e-8■■□□□ 13.4
SRSF1Q07955 NOC2L-205ENST00000487214 865 ntTSL 318.15■□□□□ 0.58e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-218ENST00000602066 799 ntAPPRIS ALT2 TSL 1 (best)18.04■□□□□ 0.488e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.488e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-216ENST00000601436 648 ntAPPRIS ALT2 TSL 317.84■□□□□ 0.458e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-207ENST00000596335 725 ntAPPRIS ALT2 TSL 317.84■□□□□ 0.458e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.378e-8■■□□□ 13.4
SRSF1Q07955 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.31■□□□□ 0.368e-8■■□□□ 13.4
SRSF1Q07955 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.368e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.318e-8■■□□□ 13.4
SRSF1Q07955 NOC2L-202ENST00000469563 878 ntTSL 216.63■□□□□ 0.258e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-205ENST00000595393 1471 ntTSL 216.25■□□□□ 0.198e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-214ENST00000601171 513 ntTSL 515.66■□□□□ 0.18e-8■■□□□ 13.4
SRSF1Q07955 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.148e-8■■□□□ 13.4
SRSF1Q07955 MYH10-206ENST00000465458 799 ntTSL 214.12□□□□□ -0.158e-8■■□□□ 13.4
SRSF1Q07955 PHPT1-204ENST00000463215 627 ntTSL 214.03□□□□□ -0.168e-8■■□□□ 13.4
SRSF1Q07955 PHPT1-203ENST00000462205 619 ntTSL 313.39□□□□□ -0.278e-8■■□□□ 13.4
SRSF1Q07955 PHPT1-206ENST00000497413 618 ntTSL 213.04□□□□□ -0.328e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-203ENST00000448635 589 ntTSL 313.03□□□□□ -0.328e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.388e-8■■□□□ 13.4
SRSF1Q07955 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.448e-8■■□□□ 13.4
SRSF1Q07955 NUP85-224ENST00000583948 1197 ntTSL 212.17□□□□□ -0.467e-7■■□□□ 13.4
SRSF1Q07955 BABAM1-204ENST00000594247 1004 ntTSL 511.82□□□□□ -0.528e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-211ENST00000599057 634 ntAPPRIS ALT2 TSL 511.82□□□□□ -0.528e-8■■□□□ 13.4
Retrieved 100 of 14,836 protein–RNA pairs in 135.1 ms