Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.27■□□□□ 0.68
CDH13P55290 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDH13P55290 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH13P55290 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH13P55290 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.27■□□□□ 0.67
CDH13P55290 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDH13P55290 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH13P55290 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDH13P55290 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH13P55290 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH13P55290 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CDH13P55290 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CDH13P55290 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH13P55290 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH13P55290 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.26■□□□□ 0.67
CDH13P55290 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDH13P55290 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.26■□□□□ 0.67
CDH13P55290 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CDH13P55290 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDH13P55290 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDH13P55290 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.25■□□□□ 0.67
CDH13P55290 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH13P55290 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDH13P55290 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH13P55290 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
CDH13P55290 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
CDH13P55290 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.25■□□□□ 0.67
CDH13P55290 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 AC023632.3-201ENST00000521633 145 ntBASIC19.25■□□□□ 0.67
CDH13P55290 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.25■□□□□ 0.67
CDH13P55290 IKBKGP1-201ENST00000612193 1073 ntBASIC19.25■□□□□ 0.67
CDH13P55290 AC092437.1-201ENST00000624794 1048 ntBASIC19.25■□□□□ 0.67
CDH13P55290 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDH13P55290 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH13P55290 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CDH13P55290 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.25■□□□□ 0.67
CDH13P55290 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDH13P55290 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDH13P55290 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.25■□□□□ 0.67
CDH13P55290 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CDH13P55290 BX323043.1-201ENST00000641006 1765 ntBASIC19.24■□□□□ 0.67
CDH13P55290 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CDH13P55290 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH13P55290 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.24■□□□□ 0.67
CDH13P55290 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.24■□□□□ 0.67
CDH13P55290 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDH13P55290 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.24■□□□□ 0.67
CDH13P55290 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 Z82202.1-201ENST00000623446 1880 ntBASIC19.24■□□□□ 0.67
CDH13P55290 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDH13P55290 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
CDH13P55290 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH13P55290 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH13P55290 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH13P55290 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH13P55290 LSM12P1-201ENST00000411836 588 ntBASIC19.23■□□□□ 0.67
CDH13P55290 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.23■□□□□ 0.67
CDH13P55290 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.23■□□□□ 0.67
CDH13P55290 AC080038.1-201ENST00000611274 1154 ntBASIC19.23■□□□□ 0.67
CDH13P55290 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CDH13P55290 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms