Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.92■□□□□ 0.94
SSR1P43307 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.92■□□□□ 0.94
SSR1P43307 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.92■□□□□ 0.94
SSR1P43307 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSR1P43307 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSR1P43307 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSR1P43307 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSR1P43307 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSR1P43307 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSR1P43307 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSR1P43307 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.91■□□□□ 0.94
SSR1P43307 KRT8P20-201ENST00000423953 1409 ntBASIC20.91■□□□□ 0.94
SSR1P43307 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.91■□□□□ 0.94
SSR1P43307 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SSR1P43307 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.91■□□□□ 0.94
SSR1P43307 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.91■□□□□ 0.94
SSR1P43307 AL031963.3-201ENST00000606441 850 ntBASIC20.91■□□□□ 0.94
SSR1P43307 TMEM179-206ENST00000616017 1645 ntBASIC20.91■□□□□ 0.94
SSR1P43307 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.91■□□□□ 0.94
SSR1P43307 AC125437.2-201ENST00000625180 2167 ntBASIC20.91■□□□□ 0.94
SSR1P43307 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SSR1P43307 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSR1P43307 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSR1P43307 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSR1P43307 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.9■□□□□ 0.94
SSR1P43307 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.9■□□□□ 0.94
SSR1P43307 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.9■□□□□ 0.94
SSR1P43307 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR1P43307 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR1P43307 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR1P43307 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR1P43307 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR1P43307 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR1P43307 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR1P43307 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR1P43307 AC105036.2-201ENST00000569468 176 ntBASIC20.9■□□□□ 0.94
SSR1P43307 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.9■□□□□ 0.94
SSR1P43307 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SSR1P43307 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSR1P43307 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSR1P43307 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.9■□□□□ 0.94
SSR1P43307 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.9■□□□□ 0.94
SSR1P43307 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SSR1P43307 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SSR1P43307 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.89■□□□□ 0.94
SSR1P43307 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.94
SSR1P43307 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SSR1P43307 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SSR1P43307 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SSR1P43307 AC090340.1-201ENST00000620778 4980 ntBASIC20.89■□□□□ 0.94
SSR1P43307 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.89■□□□□ 0.93
SSR1P43307 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSR1P43307 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.89■□□□□ 0.93
SSR1P43307 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSR1P43307 HLA-G-202ENST00000376815 851 ntBASIC20.89■□□□□ 0.93
SSR1P43307 HLA-G-203ENST00000376818 1127 ntBASIC20.89■□□□□ 0.93
SSR1P43307 MIR663A-201ENST00000385250 93 ntBASIC20.89■□□□□ 0.93
SSR1P43307 AL512625.2-201ENST00000417533 625 ntBASIC20.89■□□□□ 0.93
SSR1P43307 CDCA4P2-201ENST00000441182 718 ntBASIC20.89■□□□□ 0.93
SSR1P43307 AC026185.1-201ENST00000445748 174 ntBASIC20.89■□□□□ 0.93
SSR1P43307 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.89■□□□□ 0.93
SSR1P43307 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.89■□□□□ 0.93
SSR1P43307 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.89■□□□□ 0.93
SSR1P43307 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.89■□□□□ 0.93
SSR1P43307 C2orf69P4-201ENST00000565394 541 ntBASIC20.89■□□□□ 0.93
SSR1P43307 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSR1P43307 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SSR1P43307 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.89■□□□□ 0.93
SSR1P43307 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.93
SSR1P43307 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
SSR1P43307 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSR1P43307 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.89■□□□□ 0.93
SSR1P43307 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSR1P43307 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
SSR1P43307 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SSR1P43307 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSR1P43307 MKRN4P-201ENST00000444706 1521 ntBASIC20.88■□□□□ 0.93
SSR1P43307 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SSR1P43307 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR1P43307 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSR1P43307 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.88■□□□□ 0.93
SSR1P43307 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR1P43307 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR1P43307 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SSR1P43307 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR1P43307 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR1P43307 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.88■□□□□ 0.93
SSR1P43307 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.88■□□□□ 0.93
SSR1P43307 AF201337.1-201ENST00000520239 748 ntBASIC20.88■□□□□ 0.93
SSR1P43307 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.88■□□□□ 0.93
SSR1P43307 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.88■□□□□ 0.93
SSR1P43307 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.88■□□□□ 0.93
SSR1P43307 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.88■□□□□ 0.93
SSR1P43307 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR1P43307 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SSR1P43307 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SSR1P43307 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SSR1P43307 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms