Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RORAP35398 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.73■□□□□ 0.59
RORAP35398 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RORAP35398 GABARAPL3-202ENST00000624044 1851 ntBASIC18.73■□□□□ 0.59
RORAP35398 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RORAP35398 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RORAP35398 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RORAP35398 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RORAP35398 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RORAP35398 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RORAP35398 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RORAP35398 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RORAP35398 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.72■□□□□ 0.59
RORAP35398 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RORAP35398 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RORAP35398 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.72■□□□□ 0.59
RORAP35398 AC211429.1-201ENST00000415277 523 ntBASIC18.72■□□□□ 0.59
RORAP35398 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RORAP35398 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.72■□□□□ 0.59
RORAP35398 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.72■□□□□ 0.59
RORAP35398 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.72■□□□□ 0.59
RORAP35398 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RORAP35398 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RORAP35398 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.72■□□□□ 0.59
RORAP35398 AC073195.1-201ENST00000607241 877 ntBASIC18.72■□□□□ 0.59
RORAP35398 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RORAP35398 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RORAP35398 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RORAP35398 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RORAP35398 KRT16P6-202ENST00000425692 1426 ntBASIC18.72■□□□□ 0.59
RORAP35398 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.72■□□□□ 0.59
RORAP35398 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RORAP35398 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RORAP35398 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RORAP35398 AC116351.2-201ENST00000606540 1585 ntBASIC18.72■□□□□ 0.59
RORAP35398 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RORAP35398 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RORAP35398 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RORAP35398 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RORAP35398 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RORAP35398 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RORAP35398 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.71■□□□□ 0.59
RORAP35398 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RORAP35398 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RORAP35398 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RORAP35398 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RORAP35398 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RORAP35398 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
RORAP35398 FAM197Y1-201ENST00000421178 764 ntBASIC18.71■□□□□ 0.59
RORAP35398 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RORAP35398 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.71■□□□□ 0.59
RORAP35398 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.71■□□□□ 0.59
RORAP35398 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.71■□□□□ 0.59
RORAP35398 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RORAP35398 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.71■□□□□ 0.59
RORAP35398 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RORAP35398 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RORAP35398 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.71■□□□□ 0.59
RORAP35398 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.71■□□□□ 0.59
RORAP35398 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.71■□□□□ 0.59
RORAP35398 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RORAP35398 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.71■□□□□ 0.59
RORAP35398 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.71■□□□□ 0.58
RORAP35398 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RORAP35398 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RORAP35398 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RORAP35398 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RORAP35398 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RORAP35398 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RORAP35398 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RORAP35398 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RORAP35398 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RORAP35398 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RORAP35398 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RORAP35398 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RORAP35398 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RORAP35398 ECEL1P3-201ENST00000427961 737 ntBASIC18.7■□□□□ 0.58
RORAP35398 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.7■□□□□ 0.58
RORAP35398 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.7■□□□□ 0.58
RORAP35398 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.7■□□□□ 0.58
RORAP35398 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
RORAP35398 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RORAP35398 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.7■□□□□ 0.58
RORAP35398 AP003071.4-201ENST00000562276 1284 ntBASIC18.7■□□□□ 0.58
RORAP35398 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.7■□□□□ 0.58
RORAP35398 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RORAP35398 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RORAP35398 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.7■□□□□ 0.58
RORAP35398 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.7■□□□□ 0.58
RORAP35398 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RORAP35398 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.7■□□□□ 0.58
RORAP35398 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RORAP35398 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RORAP35398 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
RORAP35398 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms