Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
VARSP26640 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARSP26640 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VARSP26640 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.33■□□□□ 0.69
VARSP26640 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VARSP26640 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.33■□□□□ 0.69
VARSP26640 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VARSP26640 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VARSP26640 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
VARSP26640 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VARSP26640 BX119927.1-201ENST00000636596 1552 ntBASIC19.33■□□□□ 0.69
VARSP26640 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.33■□□□□ 0.68
VARSP26640 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.33■□□□□ 0.68
VARSP26640 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.33■□□□□ 0.68
VARSP26640 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VARSP26640 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VARSP26640 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VARSP26640 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
VARSP26640 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.33■□□□□ 0.68
VARSP26640 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.33■□□□□ 0.68
VARSP26640 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.33■□□□□ 0.68
VARSP26640 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
VARSP26640 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.33■□□□□ 0.68
VARSP26640 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VARSP26640 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARSP26640 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARSP26640 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARSP26640 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
VARSP26640 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.32■□□□□ 0.68
VARSP26640 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARSP26640 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.32■□□□□ 0.68
VARSP26640 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
VARSP26640 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.32■□□□□ 0.68
VARSP26640 DUSP5P2-201ENST00000426873 1033 ntBASIC19.32■□□□□ 0.68
VARSP26640 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.32■□□□□ 0.68
VARSP26640 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VARSP26640 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VARSP26640 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VARSP26640 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
VARSP26640 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
VARSP26640 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARSP26640 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARSP26640 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VARSP26640 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VARSP26640 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
VARSP26640 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.31■□□□□ 0.68
VARSP26640 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
VARSP26640 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.31■□□□□ 0.68
VARSP26640 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 AL691432.2-201ENST00000607222 2038 ntBASIC19.31■□□□□ 0.68
VARSP26640 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 PRORSD1P-201ENST00000295112 541 ntBASIC19.31■□□□□ 0.68
VARSP26640 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
VARSP26640 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
VARSP26640 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.31■□□□□ 0.68
VARSP26640 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.31■□□□□ 0.68
VARSP26640 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.31■□□□□ 0.68
VARSP26640 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
VARSP26640 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.31■□□□□ 0.68
VARSP26640 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.31■□□□□ 0.68
VARSP26640 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.31■□□□□ 0.68
VARSP26640 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.31■□□□□ 0.68
VARSP26640 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC19.31■□□□□ 0.68
VARSP26640 AC125437.2-201ENST00000625180 2167 ntBASIC19.31■□□□□ 0.68
VARSP26640 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 KRT8P17-201ENST00000453110 1448 ntBASIC19.31■□□□□ 0.68
VARSP26640 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
VARSP26640 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.31■□□□□ 0.68
VARSP26640 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VARSP26640 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
VARSP26640 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.31■□□□□ 0.68
VARSP26640 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VARSP26640 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VARSP26640 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VARSP26640 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VARSP26640 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.3■□□□□ 0.68
VARSP26640 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.3■□□□□ 0.68
VARSP26640 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VARSP26640 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.3■□□□□ 0.68
VARSP26640 AC098934.4-201ENST00000564127 592 ntBASIC19.3■□□□□ 0.68
VARSP26640 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VARSP26640 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VARSP26640 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VARSP26640 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VARSP26640 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.3■□□□□ 0.68
VARSP26640 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
VARSP26640 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.3■□□□□ 0.68
VARSP26640 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
VARSP26640 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms