Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sigmar1O55242 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sigmar1O55242 Nsd1-203ENSMUST00000224156 1149 ntBASIC11.78□□□□□ -0.52
Sigmar1O55242 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sigmar1O55242 Gm44291-201ENSMUST00000203102 2865 ntBASIC11.78□□□□□ -0.52
Sigmar1O55242 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.78□□□□□ -0.52
Sigmar1O55242 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sigmar1O55242 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.78□□□□□ -0.52
Sigmar1O55242 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sigmar1O55242 Gm42911-201ENSMUST00000199360 1630 ntBASIC11.78□□□□□ -0.52
Sigmar1O55242 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC11.78□□□□□ -0.52
Sigmar1O55242 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sigmar1O55242 Gm37736-201ENSMUST00000193564 2802 ntBASIC11.78□□□□□ -0.52
Sigmar1O55242 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sigmar1O55242 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Sigmar1O55242 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sigmar1O55242 Gm6085-201ENSMUST00000182774 1470 ntBASIC11.77□□□□□ -0.52
Sigmar1O55242 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Sigmar1O55242 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sigmar1O55242 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sigmar1O55242 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sigmar1O55242 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC11.77□□□□□ -0.52
Sigmar1O55242 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC11.77□□□□□ -0.53
Sigmar1O55242 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC11.77□□□□□ -0.53
Sigmar1O55242 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
Sigmar1O55242 AC093043.3-201ENSMUST00000226531 2273 ntBASIC11.77□□□□□ -0.53
Sigmar1O55242 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Gm10584-201ENSMUST00000207036 2628 ntBASIC11.77□□□□□ -0.53
Sigmar1O55242 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC11.77□□□□□ -0.53
Sigmar1O55242 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Gm27045-201ENSMUST00000182145 1402 ntBASIC11.77□□□□□ -0.53
Sigmar1O55242 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Sigmar1O55242 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Sigmar1O55242 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sigmar1O55242 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.76□□□□□ -0.53
Sigmar1O55242 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Sigmar1O55242 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC11.76□□□□□ -0.53
Sigmar1O55242 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
Sigmar1O55242 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Sigmar1O55242 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC11.76□□□□□ -0.53
Sigmar1O55242 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC11.76□□□□□ -0.53
Sigmar1O55242 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC11.76□□□□□ -0.53
Sigmar1O55242 Gm10657-201ENSMUST00000193528 1031 ntBASIC11.76□□□□□ -0.53
Sigmar1O55242 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC11.76□□□□□ -0.53
Sigmar1O55242 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC11.76□□□□□ -0.53
Sigmar1O55242 Gm45444-201ENSMUST00000211394 898 ntBASIC11.76□□□□□ -0.53
Sigmar1O55242 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Sigmar1O55242 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Sigmar1O55242 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms