Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.44■□□□□ 0.38
Trove2O08848 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trove2O08848 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trove2O08848 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trove2O08848 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.43■□□□□ 0.38
Trove2O08848 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trove2O08848 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Trove2O08848 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trove2O08848 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trove2O08848 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trove2O08848 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trove2O08848 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.42■□□□□ 0.38
Trove2O08848 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trove2O08848 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trove2O08848 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trove2O08848 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trove2O08848 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trove2O08848 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trove2O08848 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.42■□□□□ 0.38
Trove2O08848 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trove2O08848 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trove2O08848 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trove2O08848 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trove2O08848 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trove2O08848 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.41■□□□□ 0.38
Trove2O08848 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC17.41■□□□□ 0.38
Trove2O08848 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Trove2O08848 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trove2O08848 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trove2O08848 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trove2O08848 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trove2O08848 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trove2O08848 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trove2O08848 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trove2O08848 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trove2O08848 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trove2O08848 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trove2O08848 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trove2O08848 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trove2O08848 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trove2O08848 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trove2O08848 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.4■□□□□ 0.38
Trove2O08848 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trove2O08848 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.4■□□□□ 0.38
Trove2O08848 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.4■□□□□ 0.38
Trove2O08848 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Trove2O08848 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trove2O08848 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trove2O08848 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Trove2O08848 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trove2O08848 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trove2O08848 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trove2O08848 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trove2O08848 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Trove2O08848 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trove2O08848 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Trove2O08848 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.4■□□□□ 0.38
Trove2O08848 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trove2O08848 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
Trove2O08848 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Trove2O08848 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Trove2O08848 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Trove2O08848 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trove2O08848 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Trove2O08848 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Trove2O08848 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.39■□□□□ 0.37
Trove2O08848 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.39■□□□□ 0.37
Trove2O08848 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Trove2O08848 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Trove2O08848 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Trove2O08848 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms