Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Trav6-4A0A075B6B4 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Mir6982-201ENSMUST00000184354 68 ntBASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Gm7791-201ENSMUST00000219066 539 ntBASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav6-4A0A075B6B4 Gm42900-201ENSMUST00000197184 2167 ntBASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Gm43353-201ENSMUST00000199224 1295 ntBASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav6-4A0A075B6B4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6-4A0A075B6B4 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6-4A0A075B6B4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms