Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Gm7160-202ENSMUST00000188519 1027 ntBASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Gm29791-202ENSMUST00000207888 369 ntBASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Gm10418-201ENSMUST00000100943 576 ntBASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Gm11421-201ENSMUST00000122124 294 ntBASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Mir6538-201ENSMUST00000183713 110 ntBASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav4n-4A0A075B615 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Gm5576-201ENSMUST00000075809 1236 ntBASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 AC165080.2-201ENSMUST00000217491 1530 ntBASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav4n-4A0A075B615 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav4n-4A0A075B615 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4n-4A0A075B615 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4n-4A0A075B615 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4n-4A0A075B615 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4n-4A0A075B615 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Trav4n-4A0A075B615 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trav4n-4A0A075B615 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4n-4A0A075B615 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4n-4A0A075B615 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav4n-4A0A075B615 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms